現在、ストレージの障害により、一部データセットがアクセスできないか不完全な状態(Marked: Incomplete dataset)になっています。
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大阪大学のEMPIAR-PDBjチームでは、アジアの電顕研究者が、EMPIARデータベースに大きな電顕画像を転送するお手伝いをしています。 ネットワークでイギリスに転送する代わりに、ハードディスク自体を郵送・宅配便で大阪大学に送付、あるいは阪大のサーバまでネットワーク転送していただければ、こちらで仲介して登録サイトへの転送を代行します。 EMPIARへの登録を希望する方で、阪大へのデータ送付・転送をご希望の方は、まず、e-mail で、登録したい電顕画像データについて、ご相談ください。
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-03-14 | Rhodobacter microvirus Ebor attached to the host cell of Rhodobacter capsulatus B10 [36 tilt series in EER format] | Bardy P, MacDonald CIW, Kirchberger PC, Jenkins HT, Botka T, Byrom L, Alim NTB, Traore DAK, Konig HC, Nicholas TR, Chechik M, Hart SJ, Turkenburg JP, Blaza JN, Beatty JT, Fogg PCM, Antson AA [Pubmed: 38915634] [DOI: 10.1101/2024.06.11.598214] |
108.0 GB | 31.0 Å | |
| 2025-03-10 | TadA with AMPPNP [5108 multi-frame micrographs composed of 40 frames each in TIFF format] | Hohl M, Low HH [Pubmed: 39103374] [DOI: 10.1038/s41467-024-50280-6] |
2.2 TB | 3.8 Å | |
| 2025-03-10 | Cryo-electron micrographs of Cholinephosphotransferase in complex with diacylglycerol [multiple data sets in TIFF and MRC formats] | Roberts JR [Pubmed: 39747155] [DOI: 10.1038/s41467-024-55673-1] |
1.2 TB | 3.2 Å | |
| 2025-03-10 | Cryo-EM micrographs of purified human BIRC6 in presence of MAP1LC3B [7580 micrographs in MRC format] | Ehrmann JF, Grabarczyk DB, Clausen T [Pubmed: 36758105] [DOI: 10.1126/science.ade8873] |
473.8 GB | 3.3 Å | |
| 2025-03-05 | Cryo-EM micrographs of purified human BIRC6 in presence of CASP9 [9289 micrographs in MRC format] | Ehrmann JF, Grabarczyk DB, Clausen T [Pubmed: 36758105] [DOI: 10.1126/science.ade8873] |
580.6 GB | 3.3 Å | |
| 2025-03-05 | Cryo-EM micrographs of purified human BIRC6 in presence of HTRA2 [8842 micrographs in MRC format] | Ehrmann JF, Grabarczyk DB, Clausen T [Pubmed: 36758105] [DOI: 10.1126/science.ade8873] |
552.7 GB | 3.3 - 6.2 Å | |
| 2025-03-04 | PSI-FCPI of the diatom Thalassiosira pseudonana CCMP1335 [8950 multi-frame micrographs composed of 50 frames each in TIFF format] | Kato K, Nagao R, Nakajima Y, Shen JR [Pubmed: 39480899] [DOI: 10.7554/eLife.99858] |
1.7 TB | 2.3 Å | |
| 2025-02-27 | Single particle cryogenic electron micrographs of isolated mouse mitochondrial supercomplex I2+III2 [multiple data sets in TIFF format] | Letts JA, Padavannil A [Pubmed: 39788125] [DOI: 10.1016/j.cmet.2024.11.011] |
18.4 TB | 3.67 - 4.25 Å | |
| 2025-02-27 | EcPKS2 inhibited with Malonyl-CoA [17420 multi-frame micrographs composed of 50 frames each in TIFF format] | Schubert HL [Pubmed: 39913209] [DOI: 10.1073/pnas.2419884122] |
4.6 TB | 2.92 - 3.15 Å | |
| 2025-02-24 | Cryo-ET of Dictyostelium discoideum in HL5 medium (control condition) [59 tilt series in MRC format] | Hoffmann PC, Beck M [Pubmed: 39729993] [DOI: 10.1016/j.molcel.2024.11.038] |
386.5 GB | 30.0 Å | |
| 2025-02-24 | Cryo-ET of Dictyostelium discoideum in 0.4 M sorbitol (hyperosmotic stress) [59 tilt series in MRC format] | Hoffmann PC, Beck M [Pubmed: 39729993] [DOI: 10.1016/j.molcel.2024.11.038] |
332.1 GB | 38.0 Å | |
| 2025-02-21 | AL amyloid fibril from the FOR010 light chain [4008 multi-frame micrographs composed of 963 frames each in EER format] | Pfeiffer PB, Banerjee S, Schmidt M, Fändrich M [Pubmed: 38879609] [DOI: 10.1038/s41467-024-49520-6] |
1.8 TB | 2.25 Å | |
| 2025-02-21 | Single particle cryoEM dataset of Haspin kinase bound to a nucleosome [9999 multi-frame micrographs composed of 1485 frames each in EER format] | Hicks CW, Wolberger C [Pubmed: 39979508] [DOI: 10.1038/s41594-025-01502-y] |
5.8 TB | 2.99 - 3.64 Å | |
| 2025-02-21 | movies for NKCC1 bound with bumetanide [6027 multi-frame micrographs composed of 40 frames each in TIFF format] | Cao E [Pubmed: 39875725] [DOI: 10.1038/s44318-025-00368-6] |
1.5 TB | 2.5 Å | |
| 2025-02-13 | Polyketide Synthase EcPKS1 [2913 multi-frame micrographs composed of 36 frames each in TIFF format] | Schubert HL [Pubmed: 39913209] [DOI: 10.1073/pnas.2419884122] |
2.0 TB | 3.5 - 4.3 Å | |
| 2025-02-11 | CryoEM data for D290V hnRNPA2 LCDs [11900 multi-frame micrographs composed of 50 frames each in TIFF format] | Lu JL [Pubmed: 38072051] [DOI: 10.1016/j.jbc.2023.105531] |
1.9 TB | 3.2 - 3.9 Å | |
| 2025-02-11 | EcPKS2 with acylated pPANT and three ACP-docked positions [6244 multi-frame micrographs composed of 40 frames each in TIFF format] | Schubert HL [Pubmed: 39913209] [DOI: 10.1073/pnas.2419884122] |
2.9 TB | 2.92 - 3.11 Å | |
| 2025-02-10 | cryo-EM structure of human tRNA(GlnUUG) - PUS4 and PUS7 modified [8610 micrographs in MRC format] | Biela AP, Glatt S [Pubmed: 40301665] [DOI: 10.1038/s44318-025-00443-y] |
756.0 GB | 5.1 Å | |
| 2025-02-10 | cryo-EM structure of human tRNA(AspGUC) - PUS4 and PUS7 modified [7511 micrographs in MRC format] | Biela AP, Glatt S [Pubmed: 40301665] [DOI: 10.1038/s44318-025-00443-y] |
659.5 GB | 5.83 Å | |
| 2025-02-10 | Cryo electron structure of the ectodomain of Site-one protease without SPRING [6171 multi-frame micrographs composed of 1 frames each in EER format] | Kober DL [Pubmed: 38977690] [DOI: 10.1038/s41467-024-50068-8] |
3.1 TB | 2.27 Å | |
| 2025-02-10 | Cryo-EM structure of the active Lactococcus lactis Csm bound to target in post-cleavage stage [9775 multi-frame micrographs composed of 74 frames each in TIFF format] | Goswami HN, Wang B, Ahmadizadeh F, Addo-Yobo D, Zhao Y, Whittington AC, Terns MP [Pubmed: 38989619] [DOI: 10.1093/nar/gkae603] |
7.9 TB | 2.58 - 2.79 Å | |
| 2025-02-10 | TniQ-capped TnsC-ATP-dsDNA complex [multiple data sets in TIFF and DM4 formats] | Querques I, Schmitz M, Oberli S, Chanez C, Jinek M [Pubmed: 36435179] [DOI: 10.1016/j.cell.2022.11.009] |
2.9 TB | 3.44 Å | |
| 2025-02-10 | High resolution C. elegans 80S ribosome single particle cryoEM structure [8337 multi-frame micrographs composed of 51 frames each in TIFF format] | Sehgal E., Balasco Serrao V.H., Arribere J. [Pubmed: 39209556] [DOI: 10.1261/rna.080103.124] |
2.8 TB | 2.59 - 2.63 Å | |
| 2025-02-10 | Vibrio cholerae DdmD-DdmE holo complex [multiple data sets in TIFF and MRC formats] | Luuk L, Jinek M [Pubmed: 38870273] [DOI: 10.1126/science.adq0534] |
1.6 TB | 2.56 Å | |
| 2025-02-10 | Vibrio cholerae DdmD apo complex [multiple data sets in TIFF and MRC formats] | Luuk L, Jinek M [Pubmed: 38870273] [DOI: 10.1126/science.adq0534] |
1.5 TB | 2.55 Å |