Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2020-04-24 |  |
Rabbit muscle aldolase movies obtained using a Talos Arctica (200 kV) equipped with a K2 [3316 multi-frame micrographs composed of 44 frames each in TIFF format] | Wu M, Lander GC, Herzik MA [Pubmed: 32647824] [DOI: 10.1016/j.yjsbx.2020.100020] |
543.3 GB | 2.13 Å |
| 2023-06-30 |  |
E. coli 50S ribosome bound to tiamulin and VS1 [multiple data sets in MRC and TIFF formats] | Pellegrino J, Seiple IB, Fraser JS, Lee DJ | 2.0 TB | 2.13 Å |
| 2023-08-18 |  |
Initiation complex consisting of E. coli 70S ribosome with AAm6A mRNA codon in the A-site incubated with a ternary complex containing cognate acylated tRNA(Lys) [7207 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Glatt S [Pubmed: 37553384] [DOI: 10.1038/s41467-023-40422-7] |
2.7 TB | 2.11 - 2.62 Å |
| 2024-02-13 |  |
Single-Particle Cryo-EM of AAV2 at Various Tilts [multiple data sets in MRCS and MRC formats] | Aiyer S, Baldwin PR, Tan SM, Shan Z, Oh J, Mehrani A, Bowman ME, Louie G, Passos DO, Đorđević-Marquardt S, Mietzsch M, Hull JA, Hoshika S, Barad BA, Grotjahn DA, McKenna R, Agbandje-McKenna M, Benner SA, Noel JAP, Wang D, Tan YZ, Lyumkis D [Pubmed: 38195598] [DOI: 10.1038/s41467-023-44555-7] |
730.4 GB | 2.1 - 2.2 Å |
| 2019-07-29 |  |
Movies of horse spleen apoferritin on multifunctional ultrastable graphene supports for electron cryomicroscopy [480 multi-frame micrographs composed of 38 frames each in MRCS format] | Naydenova K, Peet MJ, Russo CJ [Pubmed: 31127045] [DOI: 10.1073/pnas.1904766116] |
570.0 GB | 2.1 Å |
| 2022-11-15 |  |
2.1 Å resolution structure of β-galactosidase obtained from Glacios equipped with Falcon 3 [multiple data sets in TIFF format] | Merk A, Darling JE, Grisshammer R, Ognjenović J | 4.8 TB | 2.1 Å |
| 2021-11-15 |  |
Apoferritin 20% glycerol, 300kV [1859 multi-frame micrographs composed of 35 frames each in TIFF format] | Basanta B, Hirschi MM, Grotjahn DA, Lander GC [Pubmed: 34981768] [DOI: 10.1107/S2059798321012110] |
477.7 GB | 2.1 Å |
| 2023-05-16 |  |
Cryo-Electron microscopy of the antimicrobial peptide Drosocin from Drosophila melanogaster bound to the E.coli 70S ribosome. [8861 multi-frame micrographs composed of 1532 frames each in EER format] | Koller TO, Morici M, Berger M, Safdari HA, Beckert B, Wilson DN [Pubmed: 36997646] [DOI: 10.1038/s41589-023-01293-7] |
7.9 TB | 2.1 - 2.8 Å |
| 2022-09-12 |  |
Structures of the Cyanobacterial Phycobilisome in the Light-harvesting and Photoprotected States [multiple data sets in MRC and TIFF formats] | Sauer PV, Dominguez-Martin MA, Kerfeld CA [Pubmed: 36045294] [DOI: 10.1038/s41586-022-05156-4] |
16.7 TB | 2.1 - 3.5 Å |
| 2021-06-04 |  |
Cryo-EM of GLP-1 receptor bound to GLP-1 and Gs protein [5739 multi-frame micrographs composed of 75 frames each in TIFF format] | Zhang X, Belousoff MJ, Zhao P, Kooistra AJ, Truong TT, Ang SY, Underwood CR, Egebjerg T, Šenel P, Stewart GD, Liang YL, Glukhova A, Venugopal H, Christopoulos A, Furness SGB, Miller LJ, Reedtz-Runge S, Langmead CJ, Gloriam DE, Danev R, Sexton PM, Wootten D [Pubmed: 33027691] [DOI: 10.1016/j.molcel.2020.09.020] |
1.9 TB | 2.1 Å |
| 2022-03-14 |  |
2.1Å T20S Proteosome from 200kV Glacios with Selectris Falcon 4 [4075 multi-frame micrographs composed of 854 frames each in EER format] | Koh FA, Khavnekar K, Kotecha A [Pubmed: 35377368] [DOI: 10.3791/63519] |
1.5 TB | 2.1 Å |
| 2018-10-23 |  |
bovine liver glutamate dehydrogenase [4982 micrographs in MRC format] | Eng ET, Kelley K, Jordan KJ, Kopylov M, Carragher BO, Potter CS | 264.5 GB | 2.1 Å |
| 2018-10-25 |  |
Thermoplasma acidophilum 20S [1175 multi-frame micrographs composed of 50 frames each in MRC format] | Eng ET, Kopylov M, Negro CJ, Dallaykan S, Rice WJ, Jordan KJ, Kelley K, Carragher BO, Potter CS | 1.5 TB | 2.1 Å |
| 2023-06-30 |  |
E. coli 50S ribosome bound to compound streptogramin A analog 3336 [multiple data sets in MRC and TIFF formats] | Pellegrino J, Seiple IB, Fraser JS, Lee DJ | 2.4 TB | 2.09 Å |
| 2023-02-28 |  |
GroEL on hydrophilized graphene grid (high particle density) [700 multi-frame micrographs composed of 40 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
133.7 GB | 2.09 Å |
| 2022-07-22 |  |
Structural conservation among variants of the SARS-CoV-2 spike postfusion bundle [multiple data sets in TIFF format] | Yang K, Brunger AT [Pubmed: 36940324] [DOI: 10.1073/pnas.2300360120] |
32.4 TB | 2.09 - 2.52 Å |
| 2021-02-05 |  |
High-resolution SARS-CoV-2 ORF3a dimer in an MSP1E3D1 lipid nanodisc [multiple data sets in EER format] | Kern DM, Hoel CM, Kotecha A, Brohawn SG [Pubmed: 34158638] [DOI: 10.1038/s41594-021-00619-0] |
3.2 TB | 2.08 Å |
| 2023-02-28 |  |
GroEL on hydrophilized graphene grid (low particle density) [6149 multi-frame micrographs composed of 40 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
1.1 TB | 2.08 Å |
| 2023-12-04 |  |
Single particle cryo-EM dataset of homohexameric 2-oxoglutarate dehydrogenase OdhA from Corynebacterium glutamicum in complex with the product succinyl-CoA [11827 multi-frame micrographs composed of 50 frames each in TIFF format] | Yang L, Mechaly A, Bellinzoni M [Pubmed: 37563123] [DOI: 10.1038/s41467-023-40253-6] |
4.0 TB | 2.07 Å |
| 2022-02-24 |  |
Tutorial for high-throughput cryo-EM structure determination of amyloids: Dataset 1 [331 multi-frame micrographs composed of 34 frames each in TIFF format] | Lövestam S, Scheres SHW [Pubmed: 35244536] [DOI: 10.7554/eLife.76494] |
476.1 GB | 2.07 Å |
| 2021-05-25 |  |
EER movies of human light chain apoferritin [multiple data sets in EER format] | Guo H, Franken E, Deng Y, Benlekbir S, Singla Lezcano G, Janssen B, Yu L, Ripstein ZA, Tan YZ, Rubinstein JL [Pubmed: 32939278] [DOI: 10.1107/S205225252000929X] |
642.1 GB | 2.07 - 3.3 Å |
| 2020-11-23 |  |
CryoEM structure of EPYC1(106-135) peptide-bound Rubisco [13727 multi-frame micrographs composed of 60 frames each in TIFF format] | He S, Chou HT, Matthies D, Wunder T, Meyer MT, Atkinson N, Martinez-Sanchez A, Jeffrey PD, Port SA, Patena W, He G, Chen VK, Hughson FM, McCormick AJ, Mueller-Cajar O, Engel BD, Yu Z, Jonikas MC [Pubmed: 33230314] [DOI: 10.1038/s41477-020-00811-y] |
5.8 TB | 2.06 Å |
| 2023-02-28 |  |
GroEL on EG-grid stored for 3 months after graphene oxidation [1209 multi-frame micrographs composed of 40 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
217.8 GB | 2.06 Å |
| 2020-11-18 |  |
2.05 angstrom resolution structure determination of sulfur oxygenase reductase using 200kV cryo-EM [2558 multi-frame micrographs composed of 50 frames each in MRC format] | Moriya T, Adachi N, Sato Y, Arakawa T, Kawasaki M, Yamada C, Fushinobu S, Senda T [Pubmed: 32775998] [DOI: 10.1016/j.yjsbx.2020.100030] |
1.7 TB | 2.05 - 2.24 Å |
| 2023-06-30 |  |
E. coli 50S ribosome bound to SLC31 [multiple data sets in MRC and TIFF formats] | Seiple I, Pellegrino J, Fraser J, Lee DJ | 3.6 TB | 2.05 Å |
