Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2020-12-22 |  |
CryoEM map and model of Nitrite Reductase at pH 6.2 [794 multi-frame micrographs composed of 49 frames each in MRC format] | Adachi N, Yamaguchi T, Moriya T, Kawasaki M, Koiwai K, Shinoda A, Yamada Y, Yumoto F, Kohzuma T, Senda T [Pubmed: 34217801] [DOI: 10.1016/j.jsb.2021.107768] |
1.2 TB | 2.99 Å |
| 2024-02-09 |  |
Single particle Cryo EM of the C-terminal half LRRK2 G2019S mutant bound to GZD-824 [7988 multi-frame micrographs composed of 40 frames each in EER format] | Villagran Suarez A, Leschziner A [Pubmed: 38039358] [DOI: 10.1126/sciadv.adk6191] |
7.0 TB | 2.99 Å |
| 2023-02-08 |  |
PKA-phosphorylated CPVT variant human ryanodine receptor type 2 R2474S in the presence of Rycal ARM210 - RyR2-R2474S + ARM210 [11749 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC, Weninger G, Dridi H, Yuan Q, Liu Y, Wronska A, Melville Z, Sittenfeld L, Reiken S, Marks AR [Pubmed: 35857850] [DOI: 10.1126/sciadv.abo1272] |
2.4 TB | 2.99 - 3.29 Å |
| 2023-12-18 |  |
ATTRV122I amyloid fibrils from hereditary ATTR amloidosis [2068 multi-frame micrographs composed of 40 frames each in TIFF format] | Steinebrei M, Schmidt M, Fändrich M [Pubmed: 37993462] [DOI: 10.1038/s41467-023-43301-3] |
644.5 GB | 2.99 Å |
| 2023-10-17 |  |
Cryo-EM structure of human Anion Exchanger 1 [7009 multi-frame micrographs composed of 40 frames each in MRC format] | Capper MJ, Yang S, Stone AC, Vatansever S, Zilberg G, Mathiharan YK, Habib R, Hutchinson K, Zhao Y, Schlessinger A, Mezei M, Osman R, Zhang B, Wacker D [Pubmed: 37679563] [DOI: 10.1038/s41594-023-01085-6] |
615.4 GB | 2.99 Å |
| 2025-02-21 |  |
Single particle cryoEM dataset of Haspin kinase bound to a nucleosome [9999 multi-frame micrographs composed of 1485 frames each in EER format] | Hicks CW, Wolberger C | 5.8 TB | 2.99 - 3.64 Å |
| 2025-07-01 |  |
CryoEM dataset of Retron-Eco1 WT filaments in the presence of NAD+ [multiple data sets in MRC format] | Carabias A, Camara-Wilpert S, Mestre MR, Lopéz-Méndez B, Hendriks IA, Zhao R, Pape T, Fuglsang A, Luk SH, Nielsen ML, Pinilla-Redondo R, Montoya G [Pubmed: 38788717] [DOI: 10.1016/j.molcel.2024.05.001] |
9.9 TB | 2.99 - 3.13 Å |
| 2020-10-09 |  |
mouse cGAS with reconstituted nucleosome [5353 multi-frame micrographs composed of 40 frames each in MRC format] | Zhao B, Xu P [Pubmed: 32911481] [DOI: 10.1038/s41586-020-2749-z] |
767.6 GB | 2.98 Å |
| 2025-03-21 |  |
Single-particle cryo-EM unaligned micrographs of antibody T5-1E11 in complex with stabilized H1N1 Influenza Hemagglutinin Trimer (A/Kiev/1/57) [6586 multi-frame micrographs composed of 40 frames each in TIFF format] | Cerutti G [DOI: 10.1016/j.str.2025.02.010] |
1.4 TB | 2.98 Å |
| 2020-03-04 |  |
Two new polymorphic structures of human full-length alpha-synuclein fibrils solved by cryo-electron microscopy [1713 micrographs in MRC format] | Guerrero-Ferreira R, Taylor NM, Arteni AA, Kumari P, Mona D, Ringler P, Britschgi M, Lauer ME, Makky A, Verasdonck J, Riek R, Melki R, Meier BH, Böckmann A, Bousset L, Stahlberg H [Pubmed: 31815671] [DOI: 10.7554/eLife.48907] |
90.9 GB | 2.98 - 3.4 Å |
| 2024-09-06 |  |
Human DNA polymerase alpha/primase - AavLEA1 (1:40 molar ratio) [4403 multi-frame micrographs composed of 40 frames each in TIFF format] | Abe KM, Li G, He Q, Grant T, Lim C | 1.1 TB | 2.98 Å |
| 2022-11-18 |  |
Cryo-EM reconstruction of TNKS2 SAM-PARP filament [multiple data sets in MRCS, MRC and TIFF formats] | Mariotti L, Inian O, Desfosses A, Beuron F, Morris E.P, Guettler S [Pubmed: 36418402] [DOI: 10.1038/s41586-022-05449-8] |
11.8 TB | 2.98 Å |
| 2023-11-06 |  |
Cryo-EM structure of H2DIDS-bound human Anion Exchanger 1 [11020 micrographs in MRC format] | Capper MJ, Yang S, Stone AC, Vatansever S, Zilberg G, Mathiharan YK, Habib R, Hutchinson K, Zhao Y, Schlessinger A, Mezei M, Osman R, Zhang B, Wacker D [Pubmed: 37679563] [DOI: 10.1038/s41594-023-01085-6] |
965.1 GB | 2.98 Å |
| 2022-11-14 |  |
Glycine and glutamate bound GluN1a-GluN2B NMDA receptors in non-active 1 conformation at 2.97 Angstrom resolution [7942 multi-frame micrographs composed of 30 frames each in TIFF format] | Chou THC, Furukawa FH [Pubmed: 35637422] [DOI: 10.1038/s41594-022-00772-0] |
1.4 TB | 2.97 Å |
| 2024-07-16 |  |
Cryo electron micrographs of retinal-free Proteoopsin bound to decanoate [20910 multi-frame micrographs composed of 40 frames each in TIFF format] | Hirschi S, Lemmin T, Fotiadis D | 3.0 TB | 2.97 Å |
| 2024-03-18 |  |
Seeded Aβ(1-40) amyloid fibril [3018 multi-frame micrographs composed of 40 frames each in TIFF format] | Pfeiffer PB, Schmidt M, Fändrich M [Pubmed: 38158175] [DOI: 10.1016/j.jmb.2023.168422] |
550.2 GB | 2.97 Å |
| 2023-07-24 |  |
Human Teneurin-2 and human Latrophilin-3 binary complex [5402 multi-frame micrographs composed of 40 frames each in MRC format] | Li J, Xie Y, Zhao M, Araç D [Pubmed: 32358586] [DOI: 10.1038/s41467-020-16029-7] |
3.3 TB | 2.97 Å |
| 2024-02-06 |  |
Single-particle cryo-EM unaligned micrographs of NTD-directed neutralizing antibody 4-18 in complex with prefusion SARS-CoV-2 spike glycoprotein [7711 multi-frame micrographs composed of 50 frames each in TIFF format] | Cerutti G, Guo Y, Zhou T, Gorman J, Lee M, Rapp M, Reddem ER, Yu J, Bahna F, Bimela J, Huang Y, Katsamba PS, Liu L, Nair MS, Rawi R, Olia AS, Wang P, Zhang B, Chuang GY, Ho DD, Sheng Z, Kwong PD, Shapiro L [Pubmed: 33789084] [DOI: 10.1016/j.chom.2021.03.005] |
2.0 TB | 2.97 Å |
| 2025-06-19 |  |
Single-particle cryo-EM unaligned micrographs of antibody T5-1E08 in complex with stabilized H1N1 Influenza Hemagglutinin Trimer (A/Kiev/1/57) [13653 multi-frame micrographs composed of 50 frames each in TIFF format] | Cerutti G [Pubmed: 40112805] [DOI: 10.1016/j.str.2025.02.010] |
3.4 TB | 2.97 Å |
| 2023-10-31 |  |
Structure and dynamics of a pentameric KCTD5/Cullin3/GBeta1Gamma2 E3 ubiquitin ligase complex [multiple data sets in MRC and MRCS formats] | Nguyen DM, Narayanan N, Kuntz DA, Prive GG [Pubmed: 38625940] [DOI: 10.1101/2023.09.20.558662] |
5.4 TB | 2.97 - 5.7 Å |
| 2025-04-09 |  |
Human pseudouridine synthase 3 (PUS3 D118A mutant) and pre-tRNA-Arg [8673 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Lin T-Y, Glatt S, Jezowski J [Pubmed: 38996458] [DOI: 10.1016/j.molcel.2024.06.013] |
3.3 TB | 2.97 Å |
| 2020-05-29 |  |
Single particle cryo-EM dataset for LetB from E.coli [multiple data sets in MRC and MRCS formats] | Isom GL, Coudray N, MacRae MR, McManus CT, Ekiert DC, Bhabha G [Pubmed: 32359438] [DOI: 10.1016/j.cell.2020.03.030] |
928.6 GB | 2.96 - 3.78 Å |
| 2025-04-07 |  |
Single-particle cryo-EM dataset of the glycosyltransferase ArnC from Salmonella enterica in the UDP-bound state from Talos Arctica microscope [multiple data sets in TIFF and MRC formats] | Ashraf KU, Punetha A, Kaelber JT, Petrou VI [Pubmed: 39974898] [DOI: 10.1101/2025.01.29.634835] |
1.9 TB | 2.96 Å |
| 2020-08-25 |  |
Structures of the human mitochondrial ribosome bound to EF-G1 reveal distinct features of mitochondrial translation elongation [stack of 6649 particles in MRC format] | Bhargava K, Datta PP, Kaushal PS, Keshavan P, Spremulli LL, Banavali NK [Pubmed: 32737313] [DOI: 10.1038/s41467-020-17715-2] |
753.5 GB | 2.96 - 3.96 Å |
| 2023-04-12 |  |
LRRC8A-BRIL:C Heteromer in GDN [multiple data sets in TIFF and MRCS formats] | Kern DM, Brohawn SG [Pubmed: 36928458] [DOI: 10.1038/s41594-023-00944-6] |
8.9 TB | 2.95 - 4.16 Å |
