Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2023-03-27 |  |
Cryo electron microscopy of beta-2-microglobulin amyloid fibrils for the variant D76N (in vitro, pH 6.2) [3849 multi-frame micrographs composed of 36 frames each in TIFF format] | Wilkinson M, Gallardo RU, Martinez RM, Guthertz N, So M, Aubrey LD, Radford SE, Ranson NA [Pubmed: 36864041] [DOI: 10.1038/s41467-023-36791-8] |
575.5 GB | 3.0 - 4.1 Å |
| 2025-05-09 |  |
Molecular architecture of thylakoid membranes within intact spinach chloroplasts [multiple data sets in TIFF and MRC formats] | Wietrzynski W, Johnson MP, Engel BD [DOI: 10.1101/2024.11.24.625035] |
303.9 GB | — |
| 2024-02-13 |  |
Plant SBF-SEM - Tobacco Leaf Chloroplast [130 micrographs in TIFF format] | Wickramanayake JS, Czymmek KJ [Pubmed: 37451777] [DOI: 10.1016/bs.mcb.2023.04.008] |
544.4 MB | — |
| 2020-11-13 |  |
Cryo electron microscopy of RagAB from P. gingivalis solubilised in DDM [3635 multi-frame micrographs composed of 48 frames each in MRC format] | White JBR [Pubmed: 32393857] [DOI: 10.1038/s41564-020-0716-y] |
1.0 TB | 3.3 - 3.4 Å |
| 2025-02-03 |  |
Class Ia ribonucleotide reductase with mechanism-based inhibitor N3CDP [6007 multi-frame micrographs composed of 30 frames each in TIFF format] | Westmoreland DE, Drennan CL [Pubmed: 39475643] [DOI: 10.1073/pnas.2417157121] |
1.9 TB | 2.6 Å |
| 2024-05-14 |  |
Aligned tilt series of stationary phase Burkholderia thailandensis tomograms [40 tilt series in MRC format] | Welch MD, Khanna K [Pubmed: 38725941] [DOI: 10.17912/micropub.biology.001178] |
26.9 GB | — |
| 2019-09-27 |  |
Cryo-EM structure of TMV in water [62 multi-frame micrographs composed of 20 frames each in TIFF format] | Weis F, Beckers M, von der Hocht I, Sachse C [Pubmed: 31535454] [DOI: 10.15252/embr.201948451] |
6.8 GB | 1.9 Å |
| 2019-09-27 |  |
Cryo-EM structure of TMV with Ca2+ at low pH [197 multi-frame micrographs composed of 40 frames each in TIFF format] | Weis F, Beckers M, von der Hocht I, Sachse C [Pubmed: 31535454] [DOI: 10.15252/embr.201948451] |
22.0 GB | 2.0 Å |
| 2024-10-04 |  |
Electron tomograms of high-pressure frozen-freeze substituted multivesicular endosomes [68 reconstructed volumes in MRC format] | Weiner E, Berryman E, Frey F, Gonzalez Solís A, Leier A, Marquez Lago T, Šarić A, Otegui MS | 66.2 GB | — |
| 2020-08-06 |  |
FIB/SEM sample dataset MCB-CLEM IV Weiner [1 multi-frame micrographs composed of 844 frames each in TIFF format] | Weiner A | 2.8 GB | — |
| 2023-02-14 |  |
Single-particle cryo–negative-stain EM dataset of the compact conformer of kinesin-1 (Kif5C/KLC1) [multiple data sets in TIFF format] | Weijman JF, Yadav SKN, Surridge KJ, Cross JA, Borucu U, Mantell J, Woolfson DN, Schaffitzel C, Dodding MP [Pubmed: 36112680] [DOI: 10.1126/sciadv.abp9660] |
1.7 TB | 29.1 Å |
| 2023-11-07 |  |
The lipid linked oligosaccharide polymerase Wzy and its regulating co-polymerase Wzz form a complex in vivo and in vitro [2351 multi-frame micrographs composed of 20 frames each in MRC format] | Weckener M, Woodward LS, Clarke BR, Liu H, Ward PN, Le Bas A, Bhella D, Whitfield C, Naismith JH [Pubmed: 36944376] [DOI: 10.1098/rsob.220373] |
273.6 GB | 3.6 Å |
| 2025-03-19 |  |
Dataset of apoferritin on HexAuFoil grids [multiple data sets in TIFF format] | Weckener M, Naylor CE | 53.4 GB | — |
| 2021-11-15 |  |
E. coli 70S-RNAP expressome complex in collided state (without NusG, 34nt intervening mRNA) [5874 multi-frame micrographs in TIFF format] [5874 multi-frame micrographs composed of 40 frames each in TIFF format] | Webster MW, Takacs M, Zhu C, Vidmar V, Eduljee A, Abdelkareem M, Weixlbaumer A [Pubmed: 32820062] [DOI: 10.1126/science.abb5036] |
1.7 TB | 3.3 Å |
| 2022-09-09 |  |
E. coli 70S-RNAP expressome complex in collided state (with NusG, 34nt intervening mRNA) [7712 multi-frame micrographs in TIFF format] [7712 multi-frame micrographs composed of 41 frames each in TIFF format] | Webster MW, Takacs M, Zhu C, Vidmar V, Eduljee A, Abdelkareem M, Weixlbaumer A [Pubmed: 32820062] [DOI: 10.1126/science.abb5036] |
2.3 TB | 3.5 Å |
| 2025-01-28 |  |
Cryo electron micrographs of disease resistance protein NRC2 from Nicotiana benthamiana [14049 multi-frame micrographs composed of 50 frames each in TIFF format] | Webster MW, Madhuprakash J, Kamoun S [DOI: 10.1101/2024.06.18.599586] |
2.7 TB | 2.9 Å |
| 2025-03-20 |  |
Cryo electron micrographs of Plastid-encoded RNA polymerase transcription elongation complex (PEP-TEC) from Sinapis alba [33330 multi-frame micrographs composed of 40 frames each in TIFF format] | Webster MW [Pubmed: 38428394] [DOI: 10.1016/j.cell.2024.01.036] |
5.9 TB | 2.62 - 5.0 Å |
| 2024-11-12 |  |
Cryo electron micrographs of Plastid-encoded RNA polymerase (PEP) from Sinapis alba [21347 multi-frame micrographs composed of 50 frames each in TIFF format] | Webster MW [Pubmed: 38428394] [DOI: 10.1016/j.cell.2024.01.036] |
4.5 TB | 2.3 - 2.9 Å |
| 2020-09-30 |  |
Structure of the Bacterial Ribosome at 2 Å Resolution [multiple data sets in TIFF format] | Watson ZL, Ward FR, Méheust R, Ad O, Schepartz A, Banfield JF, Cate JH [Pubmed: 32924932] [DOI: 10.7554/eLife.60482] |
2.1 TB | 1.98 Å |
| 2024-05-13 |  |
Cryo-EM structure of ERGIC-53 H34 deletion mutant in complex with MCFD2 [6175 multi-frame micrographs composed of 50 frames each in TIFF format] | Watanabe S, Inaba K [Pubmed: 38493152] [DOI: 10.1038/s41467-024-46747-1] |
1.3 TB | 3.78 Å |
| 2024-05-20 |  |
Cryo-EM structure of full-length ERGIC-53 in complex with MCFD2 [6345 multi-frame micrographs composed of 48 frames each in TIFF format] | Watanabe S, Inaba K [Pubmed: 38493152] [DOI: 10.1038/s41467-024-46747-1] |
1.4 TB | 2.53 - 6.76 Å |
| 2021-11-08 |  |
The frame-aligned tilt series of of FIB-milled HEK293 cells treated with Taxol [40 tilt series in MRC format] | Watanabe R, Buschauer R, Böhning J, Audagnotto M, Lasker K, Lu TW, Boassa D, Taylor S, Villa E [Pubmed: 32783917] [DOI: 10.1016/j.cell.2020.08.004] |
2.1 GB | — |
| 2021-11-08 |  |
Frame aligned tilt series of cryo-FIB milled HEK293 cells expressing pathogenic LRRK2(I2020T)mutant [39 tilt series in MRC format] | Watanabe R, Buschauer R, Böhning J, Audagnotto M, Lasker K, Lu TW, Boassa D, Taylor S, Villa E [Pubmed: 32783917] [DOI: 10.1016/j.cell.2020.08.004] |
2.1 GB | — |
| 2024-11-27 |  |
Structure of DNMT3A1-DNMt3L complex on a nucleosome [multiple data sets in TIFF format] | Wapenaar H [DOI: 10.1101/2023.10.29.564595] |
2.9 TB | 3.1 Å |
| 2014-09-07 |  |
Full virus map of Brome Mosaic Virus (micrographs and particle coordinates) [multiple data sets in TIFF and MRC formats] | Wang Z, Hryc C, Bammes B, Afonine P, Jakana J, Chen DH, Liu XA, Baker M, Kao C, Ludtke S, Schmid M, Adams P, Chiu W [Pubmed: 25185801] [DOI: 10.1038/ncomms5808] |
1.7 TB | 3.8 Å |
