Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2022-11-14 |  |
Cryo-EM movies of the human α1β3γ2 GABAA receptor in a lipid bilayer bound to alprazolam and GABA [815 multi-frame micrographs composed of 75 frames each in TIFF format] | Masiulis S, Desai R, Uchanski T, Serna Martin I, Laverty D, Karia D, Malinauskas T, Zivanov J, Pardon E, Kotecha A, Steyaert J, Miller KW, Aricescu AR [Pubmed: 30602790] [DOI: 10.1038/s41586-018-0832-5] |
1.0 TB | 3.26 Å |
| 2023-08-18 |  |
Unaligned cryo-EM micrographs of AL55 amyloid fibrils extracted from the kidney of an AL amyloidosis patient [1819 multi-frame micrographs composed of 40 frames each in MRC format] | Chaves-Sanjuan A, Puri S, Schulte T, Ricagno S [Pubmed: 37516426] [DOI: 10.1016/j.jmb.2023.168215] |
1.0 TB | 4.0 Å |
| 2020-11-13 |  |
Cryo electron microscopy of RagAB from P. gingivalis solubilised in DDM [3635 multi-frame micrographs composed of 48 frames each in MRC format] | White JBR [Pubmed: 32393857] [DOI: 10.1038/s41564-020-0716-y] |
1.0 TB | 3.3 - 3.4 Å |
| 2025-06-11 |  |
Microtubule dynamics are defined by conformations and stability of clustered protofilaments - shortening microtubules [1576 multi-frame micrographs composed of 1 frames each in MRC format] | Kalutskii M, Grubmüller H, Volkov VA, Igaev M [Pubmed: 40440074] [DOI: 10.1073/pnas.2424263122] |
1.0 TB | — |
| 2022-01-24 |  |
Single particle cryo-EM dataset of sarkosyl-insoluble fraction from the frontal cortex of an individual with pathological aging of amyloid-β 42 filaments [1189 multi-frame micrographs composed of 48 frames each in TIFF format] | Yang Y, Arseni D, Zhang W, Huang M, Lovestam SKA, Schweighauser M, Kotecha A, Murzin AG, Peak-Chew SY, Macdonald J, Lavenir I, Garringer HJ, Gelpi E, Newell KL, Kovacs GG, Vidal R, Ghetti B, Falcon B, Scheres SHW, Goedert M [Pubmed: 35025654] [DOI: 10.1126/science.abm7285] |
1.0 TB | 2.8 Å |
| 2024-05-13 |  |
Cryo-EM of SARS-CoV-2 5' proximal stem-loops 5-6 with SL5c extended [multiple data sets in TIFF and MRC formats] | Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R [Pubmed: 38427602] [DOI: 10.1073/pnas.2320493121] |
1.0 TB | 9.1 Å |
| 2024-11-19 |  |
Gallus gallus (chicken) calcium homeostasis modulator 1 (CALHM1) channel [5544 multi-frame micrographs composed of 30 frames each in TIFF format] | Syrjanen JL, Furukawa H [Pubmed: 37380652] [DOI: 10.1038/s41467-023-39388-3] |
1.0 TB | 3.36 Å |
| 2024-06-06 |  |
Single-particle cryo-EM unaligned micrographs of neutralizing antibody 910-30 in complex with prefusion SARS-CoV-2 spike glycoprotein [3781 multi-frame micrographs composed of 50 frames each in TIFF format] | Banach BB, Cerutti G, Fahad AS, Shen CH, Oliveira De Souza M, Katsamba PS, Tsybovsky Y, Wang P, Nair MS, Huang Y, Francino-Urdániz IM, Steiner PJ, Gutiérrez-González M, Liu L, López Acevedo SN, Nazzari AF, Wolfe JR, Luo Y, Olia AS, Teng IT, Yu J, Zhou T, Reddem ER, Bimela J, Pan X, Madan B, Laflin AD, Nimrania R, Yuen KY, Whitehead TA, Ho DD, Kwong PD, Shapiro L, DeKosky BJ [Pubmed: 34587480] [DOI: 10.1016/j.celrep.2021.109771] |
1.0 TB | 4.75 Å |
| 2022-09-23 |  |
CryoEM structure of the A.aeolicus WzmWzt transporter bound to 3-O-methyl-D-mannose [3799 multi-frame micrographs composed of 40 frames each in TIFF format] | Spellmon N [Pubmed: 36064941] [DOI: 10.1038/s41467-022-32597-2] |
1.0 TB | 3.7 Å |
| 2022-11-01 |  |
Cryo-EM movies of the human α1β3γ2 GABAA receptor in a lipid bilayer bound to picrotoxin [803 multi-frame micrographs composed of 75 frames each in TIFF format] | Masiulis S, Desai R, Uchanski T, Serna Martin I, Laverty D, Karia D, Malinauskas T, Zivanov J, Pardon E, Kotecha A, Steyaert J, Miller KW, Aricescu AR [Pubmed: 30602790] [DOI: 10.1038/s41586-018-0832-5] |
1.0 TB | 3.1 Å |
| 2024-09-06 |  |
Human PRC2 - RvLEAM (short) (1:6 molar ratio) [3896 multi-frame micrographs composed of 40 frames each in TIFF format] | Abe KM, Li G, He Q, Grant T, Lim CJ | 1.0 TB | 3.76 Å |
| 2025-01-17 |  |
Cryo-EM structure of the decameric TraT surface exclusion lipoprotein from Escherichia coli (F plasmid) [8061 multi-frame micrographs composed of 40 frames each in TIFF format] | Beis K, Seddon C [DOI: 10.1101/2024.08.09.607165] |
1023.7 GB | 2.66 Å |
| 2025-02-10 |  |
Single particle analysis datasets of in vitro grown aSyn filaments [multiple data sets in MRC format] | Sicking K, Al-Azzani M, Outeiro TF, Fernandez-Busnadiego R [Pubmed: 39399048] [DOI: 10.1101/2024.09.23.24313864] |
1023.5 GB | 2.7 Å |
| 2023-08-18 |  |
Mouse heavy chain apoferritin in vitreous ice after plunge-freezing [4745 multi-frame micrographs composed of 784 frames each in EER format] | Bongiovanni G, Harder OF, Voss JM, Drabbels M, Lorenz UJ [Pubmed: 37219589] [DOI: 10.1107/S2059798323003431] |
1023.1 GB | 1.61 Å |
| 2022-07-12 |  |
CryoEM single particle dataset for psNb 2-34 with spike protein [2660 multi-frame micrographs composed of 40 frames each in TIFF format] | Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams Jr KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y [Pubmed: 35738279] [DOI: 10.1016/j.celrep.2022.111004] |
1021.3 GB | 2.9 Å |
| 2022-12-06 |  |
Single particle cryo-EM structure of RIG-I in complex with p3dsRNA [3480 multi-frame micrographs composed of 34 frames each in TIFF format] | Wang W, Pyle AM [Pubmed: 36272408] [DOI: 10.1016/j.molcel.2022.09.029] |
1020.2 GB | 3.54 Å |
| 2024-12-21 |  |
Cryo electron micrographs of AP-3 core bound to Arf1 and LAMPI on a lipid nanodisc [11601 micrographs in MRC format] | Baker RW, Begley M [Pubmed: 38895279] [DOI: 10.1101/2024.06.05.597630] |
1018.6 GB | 4.2 - 5.6 Å |
| 2023-08-20 |  |
The J-K RNA fragment of encephalomyocarditis virus IRES in complex with eIF4G-HEAT1 and eIF4A [6194 multi-frame micrographs composed of 40 frames each in TIFF format] | Suzuki H, Fujiyoshi Y | 1018.5 GB | 3.76 Å |
| 2022-11-14 |  |
Cryo-EM movies of the human α1β3γ2 GABAA receptor in a lipid bilayer bound to picrotoxin and GABA [794 multi-frame micrographs composed of 75 frames each in TIFF format] | Masiulis S, Desai R, Uchanski T, Serna Martin I, Laverty D, Karia D, Malinauskas T, Zivanov J, Pardon E, Kotecha A, Steyaert J, Miller KW, Aricescu AR [Pubmed: 30602790] [DOI: 10.1038/s41586-018-0832-5] |
1017.1 GB | 3.04 Å |
| 2025-04-14 |  |
Cryo electron microscopy of in vitro assembled NC-4 cages [28 multi-frame micrographs composed of 1 frames each in MRC format] | Hori M, Steinauer A, Tetter S, Hälg J, Manz EM, Hilvert D [Pubmed: 38678040] [DOI: 10.1038/s41467-024-47808-1] |
1016.9 GB | 3.5 Å |
| 2024-02-28 |  |
Apo Malacoceros FaNaC1 in lipid nanodiscs [multiple data sets in TIFF format] | Kalienkova V, Dandamudi M, Paulino C, Lynagh T [Pubmed: 38337033] [DOI: 10.1038/s41594-023-01198-y] |
1013.1 GB | 2.7 Å |
| 2024-04-24 |  |
Human methylenetetrahydrofolate reductase plus SAM [multiple data sets in EER format] | Blomgren LKM, Basle A, McCorvie TJ [DOI: 10.1038/s41467-024-47174-y] |
1012.6 GB | 2.91 Å |
| 2022-12-16 |  |
Amyloid fibril structure from the vascular variant of systemic AA amyloidosis [multiple data sets in TIFF format] | Banerjee S, Baur J, Daniel C, Pfeiffer PB, Hitzenberger M, Kuhn L, Wiese S, Bijzet J, Haupt C, Amann KU, Zacharias M, Hazenberg BPC, Westermark GT, Schmidt M, Fändrich M [Pubmed: 36433936] [DOI: 10.1038/s41467-022-34636-4] |
1009.8 GB | 2.56 Å |
| 2022-11-01 |  |
Cryo-EM movies of the human α1β3γ2 GABAA receptor in a lipid bilayer [790 multi-frame micrographs composed of 75 frames each in TIFF format] | Laverty D, Masiulis S, Aricescu AR [Pubmed: 30602789] [DOI: 10.1038/s41586-018-0833-4] |
1007.4 GB | 3.2 Å |
| 2023-02-06 |  |
D-cycloserine and glutamate bound human GluN1a-GluN2C NMDA receptor in nanodisc [4714 multi-frame micrographs composed of 30 frames each in TIFF format] | Chou TH [Pubmed: 36309015] [DOI: 10.1016/j.molcel.2022.10.008] |
1007.2 GB | 3.28 - 3.75 Å |
