Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2019-04-18 |  |
CryoET of mouse protocadherin gamma B6 on membranes (without energy filter) [multiple data sets in MRC format] | Brasch J, Goodman KM, Noble AJ, Mannepalli S, Bahna F, Rapp M, Dandey VP, Bepler T, Berger B, Maniatis T, Potter CS, Carragher B, Honig B, Shapiro L [Pubmed: 30971825] [DOI: 10.1038/s41586-019-1089-3] |
363.4 GB | — |
| 2023-11-06 |  |
Cryo electron microscopy movies of telithromycin bound to the Saccharomyces cerevisiae 80S ribosome (G2400A mutant). [4371 multi-frame micrographs composed of 30 frames each in MRCS format] | Koller TO, Wilson DN [Pubmed: 33990576] [DOI: 10.1038/s41467-021-23068-1] |
363.4 GB | 2.877 Å |
| 2022-04-19 |  |
Atomic structure of Lanreotide nanotubes revealed by cryo-EM [stack of 631121 particles in MRCS format] | Pieri L, Wang F, Bressanelli S, Egelman EH, Paternostre M [Pubmed: 35042822] [DOI: 10.1073/pnas.2120346119] |
362.5 GB | 2.46 Å |
| 2023-08-18 |  |
Cryo-EM structure of the wild-type solitary ECF module in DDM micelles in the ATPase open and nucleotide-free conformation (200 kV) [1862 multi-frame micrographs composed of 60 frames each in TIFF format] | Thangaratnarajah C, Rheinberger J, Paulino C, Slotboom DJ [Pubmed: 37491368] [DOI: 10.1038/s41467-023-40266-1] |
360.8 GB | 4.3 Å |
| 2021-03-19 |  |
Complex of yeast cytoplasmic dynein MTBD-High and MT without DTT [1825 multi-frame micrographs composed of 40 frames each in TIFF format] | Komori Y, Nishida N, Takarada O, Watanabe A, Tamura S, Kubo S, Shimada I, Kikkawa M [Pubmed: 32098965] [DOI: 10.1038/s41467-020-14842-8] |
360.5 GB | 3.94 Å |
| 2021-09-17 |  |
Cryo-EM structure of SARS-CoV-2 NSP15 NendoU at pH 6.0 [4080 micrographs in MRC format] | Godoy AS | 359.3 GB | 2.48 Å |
| 2021-02-05 |  |
Affinity-purified RqcP/YabO-ribosome-associated quality control complexes from Bacillus subtilis [5416 multi-frame micrographs composed of 20 frames each in TIFF format] | Crowe-McAuliffe CT, Takada H, Murina V, Atkinson GC, Wilson DN, Hauryliuk V [Pubmed: 33259810] [DOI: 10.1016/j.molcel.2020.11.002] |
358.1 GB | 2.6 - 4.9 Å |
| 2023-06-09 |  |
CryoEM movies of extracted Arctic variant Aß42 fibrils from mouse brains [2138 multi-frame micrographs composed of 40 frames each in TIFF format] | Leistner C, Wilkinson M, Burgess A, Lovatt M, Goodbody S, Xu Y, Deuchars S, Radford SE, Ranson NA, Frank RAW [Pubmed: 37198197] [DOI: 10.1038/s41467-023-38495-5] |
356.5 GB | 3.0 Å |
| 2023-02-28 |  |
Single particle cryo-EM dataset of mitochondrial respiratory complex I from Bos taurus in DDM [2370 multi-frame micrographs composed of 24 frames each in MRC format] | Bridges HR, Blaza JN, Yin Z, Chung I, Pollak MN, Hirst J [Pubmed: 36701435] [DOI: 10.1126/science.ade3332] |
352.7 GB | 2.8 - 3.5 Å |
| 2022-07-27 |  |
cryoEM structure of Go-coupled 5-HT5A with agonist 5-CT [4006 micrographs in MRC format] | Fay JF, Roth BL, Zhang S [Pubmed: 35835867] [DOI: 10.1038/s41594-022-00796-6] |
351.8 GB | 2.73 Å |
| 2018-08-16 |  |
Combining high-resolution cryo-electron microscopy and mutagenesis to develop cowpea mosaic virus for bionanotechnology [5619 multi-frame micrographs composed of 1 frames each in MRC format] | Thompson RF, Iadanza MG, Hesketh EL, Rawson S, Ranson NA, Meshcheriakova Y, Durrant A, Lomonossoff GP [Pubmed: 30487656] [DOI: 10.1038/s41596-018-0084-8] |
351.5 GB | 2.7 Å |
| 2020-12-02 |  |
Single-particle cryo-EM micrographs of a chromatosome containing human linker histone H1.0 [1069 multi-frame micrographs composed of 76 frames each in TIFF format] | Zhou BR [Pubmed: 33238161] [DOI: 10.1016/j.molcel.2020.10.038] |
349.6 GB | 2.93 Å |
| 2023-01-18 |  |
Movies of apoferritin collected at different dose rates on the Direct Electron Apollo direct detector - 30 eps [1478 multi-frame micrographs composed of 40 frames each in TIFF format] | Peng R, Fu X, Mendez JH, Randolph PS, Bammes BE, Stagg SM [Pubmed: 36578473] [DOI: 10.1016/j.yjsbx.2022.100080] |
348.5 GB | — |
| 2021-07-09 |  |
Cryo-electron tomography of the fungal membrane-assembled retromer:Grd19 coat containing Kex2 cargo motif [multiple data sets in TIFF and MRC formats] | Leneva N, Kovtun O, Morado DR, Briggs JAG, Owen DJ [Pubmed: 33762348] [DOI: 10.1126/sciadv.abf8598] |
347.7 GB | 9.2 - 9.5 Å |
| 2018-05-11 |  |
Benchmarking cryo-EM single particle analysis workflow [1626 multi-frame micrographs composed of 30 frames each in MRC format] | Kim LK, Rice WJ, Eng ET, Kopylov M, Cheng A, Raczkowski AM, Jordan KJ, Bobe D, Potter CS, Carragher B [Pubmed: 29951483] [DOI: 10.3389/fmolb.2018.00050] |
345.0 GB | 3.0 - 4.6 Å |
| 2023-04-28 |  |
ARE-ABCF VmlR2 in complex with the 70S ribosome [6384 micrographs in MRC format] | Crowe-McAuliffe C, Hauryliuk V, Wilson DN [Pubmed: 36951104] [DOI: 10.1093/nar/gkad193] |
338.6 GB | 2.9 Å |
| 2020-12-09 |  |
SBF SEM images of a Zebrafish hindbrain macrophage containing a replicating Toxoplasma gondii tachizoite [multiple data sets in DM4 format] | Peddie CJ, Domart MC, Collinson L [Pubmed: 32461265] [DOI: 10.1242/dmm.043091] |
338.4 GB | — |
| 2020-07-30 |  |
Cryo electron microscopy of RyR1 in the presence and abscence of Ca, Caffeine and ATP ligands [stack of 791956 particles in SPIDER format] | Dashti A [Pubmed: 32948759] [DOI: 10.1038/s41467-020-18403-x] |
334.2 GB | 4.5 Å |
| 2022-10-31 |  |
cryoEM structure of Gq-coupled MRGPRX1 with peptide agonist BAM8-22 [3801 micrographs in MRC format] | Liu Y, Cao C, Huang XP, Gumpper RH, Rachman MM, Shih SL, Krumm BE, Zhang S, Shoichet BK, Fay JF, Roth BL [Pubmed: 36302898] [DOI: 10.1038/s41589-022-01173-6] |
333.7 GB | 2.87 Å |
| 2024-02-13 |  |
Cryo electron microscopy of Virus-like Particle based on PVY coat protein with T43C and D136C mutation [461 multi-frame micrographs composed of 38 frames each in TIFF format] | Kavcic L, Kezar A [Pubmed: 38233506] [DOI: 10.1038/s42004-024-01100-x] |
332.6 GB | 2.41 Å |
| 2020-12-09 |  |
SA-like and SD-like states of human 26S Proteasome with non-cleavable M1-linked hexaubiquitin and E3 ubiquitin ligase E6AP/UBE3A [6216 micrographs in MRC format] | Chen X, Walters KJ [Pubmed: 32783951] [DOI: 10.1016/j.str.2020.07.011] |
330.3 GB | 4.1 - 5.7 Å |
| 2020-12-09 |  |
SA-like and SD-like states of human 26S Proteasome with non-cleavable M1-linked hexaubiquitin (dataset 2) [6220 micrographs in MRC format] | Chen X, Walters KJ [Pubmed: 32783951] [DOI: 10.1016/j.str.2020.07.011] |
330.2 GB | 5.8 - 5.96 Å |
| 2020-07-27 |  |
Saccharomyces cerevisiae fatty acid synthase complex with bound gamma subunit [multiple data sets in MRC and MRCS formats] | Singh K, Graf B, Stark H, Chari A [Pubmed: 32160528] [DOI: 10.1016/j.cell.2020.02.034] |
329.3 GB | 2.8 Å |
| 2022-11-14 |  |
The structure of PldA-PA3488 complex [3732 micrographs in MRC format] | Yang X, Li Z, Zhao L, She Z, Gao Z, Sui SF, Dong Y, Li Y [Pubmed: 36216841] [DOI: 10.1038/s41467-022-33690-2] |
327.7 GB | 3.05 Å |
| 2019-01-18 |  |
Calicivirus VP2 forms a portal to mediate endosome escape [5198 micrographs in MRC format] | Conley MJ, McElwee M, Azmi LB, Gabrielsen M, Byron O, Goodfellow IG, Bhella D [Pubmed: 30626974] [DOI: 10.1038/s41586-018-0852-1] |
324.9 GB | 3.0 Å |
