EMPIAR-11624 - The J-K RNA fragment of encephalomyocarditis virus IRES in complex with eIF4G-HEAT1 and eIF4A [6194 multi-frame micrographs composed of 40 frames each in TIFF format]

EMPIAR-11624

The J-K RNA fragment of encephalomyocarditis virus IRES in complex with eIF4G-HEAT1 and eIF4A [6194 multi-frame micrographs composed of 40 frames each in TIFF format]

Publication:

Dynamically regulated two-site interaction of viral RNA to capture host translation initiation factor

Imai S, Suzuki H, Fujiyoshi Y, Shimada I

(---)

Related EMDB entry:

EMD-35041

Deposited:

2023-03-16

Released:

2023-08-20

Last modified:

2023-08-21

Imageset size:

1018.54 GB

Imageset DOI:

10.6019/EMPIAR-11624

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. Unaligned multi-frame TIFF compressed movies of J-K/eIF4G-HEAT1/eIF4A

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

6194

Image size:

(3710, 3838)

Pixel type:

UNSIGNED 16 BIT INTEGER

Pixel spacing:

(0.765, 0.765)

Details:

Gain reference (MRC format) is included in each folder with the movie files. Each gain reference was created from the dataset by using the 'relion_estimate_gain' command. Acceleration Voltage: 300 kV. Cs: 3.4 mm. Dose per frame: 1.7 e/A^2.

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Citations

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Ramírez-Aportela E, Zarrabeitia OL, Fonseca YC, Ceska T, Subramaniam S, Carazo JM, Sorzano COS. (2026)

A variational framework with composite sparse regularization for cryo-electron tomography reconstruction.

Yu C, Xu Z, Zeng Q, Wan X, El-Messiry H, Zhang F, Han R. (2026)

Helical reconstruction of amyloids in cryoSPARC.

Schaefer JH, O'Neill RT, Donnelly JP, Powers ET, Kelly JW, Lander GC. (2026)

An unattended image-processing pipeline for on-the-fly quality assessment and 3D exploration in cryo-EM.

Marchán Torres D, Conesa P, Garcia A, Iceta M, Broche L, Gragera M, Linares R, Kwong HS, Chichón FJ, Svensson O, Arranz R, Effantin G, Kandiah E, Carazo JM, Sorzano COS. (2026)

CryoFSL: an annotation-efficient, few-shot learning framework for robust protein particle picking in cryo-electron microscopy micrographs.

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prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

Unbend, correction of local beam-induced sample motion in cryo-EM images using a 3D spline model.

Kong L, Zottig X, Elferich J, Grigorieff N. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

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