Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2022-10-31 |  |
Cryo-EM dataset of P.berghei kinesin-8B motor domains in no nucleotide state bound to tubulin dimer [multiple data sets in MRC format] | Liu T, Shilliday F, Cook AD, Moores CA [Pubmed: 36384964] [DOI: 10.1038/s41467-022-34710-x] |
890.0 GB | 4.3 Å |
| 2020-11-20 |  |
CryoEM structure of Rubisco in the apo state [1834 multi-frame micrographs composed of 50 frames each in TIFF format] | He S, Chou HT, Matthies D, Wunder T, Meyer MT, Atkinson N, Martinez-Sanchez A, Jeffrey PD, Port SA, Patena W, He G, Chen VK, Hughson FM, McCormick AJ, Mueller-Cajar O, Engel BD, Yu Z, Jonikas MC [Pubmed: 33230314] [DOI: 10.1038/s41477-020-00811-y] |
895.3 GB | 2.68 Å |
| 2020-10-28 |  |
The α-synuclein hereditary mutation E46K unlocks a more stable, pathogenic fibril structure [4919 multi-frame micrographs composed of 30 frames each in TIFF format] | Boyer DR, Li B, Sun C, Fan W, Zhou K, Hughes MP, Sawaya MR, Jiang L, Eisenberg DS [Pubmed: 32015135] [DOI: 10.1073/pnas.1917914117] |
897.9 GB | 2.5 Å |
| 2022-09-06 |  |
Oligomeric interactions maintain active-site structure in a non-cooperative enzyme family [3854 multi-frame micrographs composed of 50 frames each in TIFF format] | Li YH, Zhang RZ, Chi W, Forouhar F, Clarke OB, Vorobiev S, Singh S, Montelione GT, Szyperski T, Xu Y, Hunt JF [Pubmed: 35801308] [DOI: 10.15252/embj.2021108368] |
902.0 GB | 3.13 - 4.28 Å |
| 2021-09-17 |  |
Single particle cryo-EM dataset of sarkosyl-insoluble fraction from the frontal cortex of an individual with mutation +16 in intron 10 of MAPT [4805 multi-frame micrographs composed of 52 frames each in TIFF format] | Shi Y, Zhang W, Yang Y, Murzin AG, Falcon B, Kotecha A, van Beers M, Tarutani A, Kametani F, Garringer HJ, Vidal R, Hallinan GI, Lashley T, Saito Y, Murayama S, Yoshida M, Tanaka H, Kakita A, Ikeuchi T, Robinson AC, Mann DMA, Kovacs GG, Revesz T, Ghetti B, Hasegawa M, Goedert M, Scheres SHW [Pubmed: 34588692] [DOI: 10.1038/s41586-021-03911-7] |
911.2 GB | 3.4 Å |
| 2022-09-09 |  |
Cryo-EM structure of GH31 alpha-1,3-glucosidase from Lactococcus lactis subsp. cremoris [995 multi-frame micrographs composed of 50 frames each in TIFF format] | Ikegaya M, Moriya T, Adachi N, Kawasaki M, Park EY, Miyazaki T [Pubmed: 35293315] [DOI: 10.1016/j.jbc.2022.101827] |
911.2 GB | 2.73 Å |
| 2024-02-01 |  |
Purified tails from bacteriophage T5 after interaction with E. coli receptor FhuA inserted into nanodiscs - dataset 2 [5733 multi-frame micrographs composed of 40 frames each in MRC format] | Linares R, Arnaud C, Effantin G, Darnault C, Epalle NH, Erba EB, Schoehn G, Breyton C [Pubmed: 36961893] [DOI: 10.1126/sciadv.ade9674] |
917.9 GB | 3.45 - 4.32 Å |
| 2020-12-22 |  |
Cryo electron microscopy single particle of PIKfyve lipid kinase complex [2838 multi-frame micrographs composed of 31 frames each in TIFF format] | Lees JA, Li P, Reinisch KM [Pubmed: 33098764] [DOI: 10.1016/j.molcel.2020.10.003] |
920.4 GB | 5.25 Å |
| 2019-12-20 |  |
Apo-state Streptavidin [multiple data sets in MRCS format] | Han Y, Fan X, Wang H, Zhao F, Tully CG, Kong J, Yao N, Yan N [Pubmed: 31879346] [DOI: 10.1073/pnas.1919114117] |
922.4 GB | 2.6 Å |
| 2023-03-01 |  |
CryoEM structure of Go-coupled 5-HT5AR in complex with Methylergometrine [10530 micrographs in MRC format] | Fay JF, Roth BL, Zhang S [Pubmed: 35835867] [DOI: 10.1038/s41594-022-00796-6] |
924.6 GB | 2.75 Å |
| 2023-06-07 |  |
Cryo-electron micrographs of Hantaan virus polymerase in elongation state [3785 multi-frame micrographs composed of 50 frames each in TIFF format] | Durieux Trouilleton Q, Arragain B, Malet H [Pubmed: 37221161] [DOI: 10.1038/s41467-023-38555-w] |
927.5 GB | 3.14 Å |
| 2020-05-29 |  |
Single particle cryo-EM dataset for LetB from E.coli [multiple data sets in MRC and MRCS formats] | Isom GL, Coudray N, MacRae MR, McManus CT, Ekiert DC, Bhabha G [Pubmed: 32359438] [DOI: 10.1016/j.cell.2020.03.030] |
928.6 GB | 2.96 - 3.78 Å |
| 2022-07-15 |  |
CryoEM single particle dataset for psNb 2-65 with spike protein [1625 multi-frame micrographs composed of 40 frames each in TIFF format] | Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams Jr KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y [Pubmed: 35738279] [DOI: 10.1016/j.celrep.2022.111004] |
932.2 GB | 3.2 Å |
| 2022-06-22 |  |
Cryo-EM structure of a dimeric B-Raf:14-3-3 complex reveals asymmetry in the active sites of B-Raf kinases [multiple data sets in MRCS and MRC formats] | Kondo Y, Ognjenovic J, Banerjee S, Karandur D, Merk A, Kulhanek K, Wong K, Roose JP, Subramaniam S, Kuriyan J [Pubmed: 31604311] [DOI: 10.1126/science.aay0543] |
934.3 GB | 3.9 Å |
| 2022-04-25 |  |
Cryo-EM data used for the determination of LACV-L in transcription capped primer cleavage state [3270 multi-frame micrographs composed of 60 frames each in TIFF format] | Malet H, Arragain B, Durieux Trouilleton Q, Cusack S, Schoehn G [Pubmed: 35173159] [DOI: 10.1038/s41467-022-28428-z] |
934.6 GB | 3.9 Å |
| 2019-07-25 |  |
Open state structure of the full-length TRPV2 cation channel with a resolved pore turret domain [2447 multi-frame micrographs composed of 50 frames each in MRCS format] | Dosey TL, Wang Z, Fan G [Pubmed: 30598551] [DOI: 10.1038/s41594-018-0168-8] |
934.8 GB | 3.6 Å |
| 2021-11-09 |  |
Cryo-electron microscopy reconstruction of leukotriene C4 bound bovine MRP1 [2629 multi-frame micrographs composed of 50 frames each in TIFF format] | Johnson ZL, Chen J [Pubmed: 28238471] [DOI: 10.1016/j.cell.2017.01.041] |
938.2 GB | 3.34 Å |
| 2022-09-13 |  |
Cryo-EM of ADP-F-actin [multiple data sets in TIFF and MRCS formats] | Reynolds MJ, Hachicho C, Carl AG, Gong R, Alushin GM [Pubmed: 36289330] [DOI: 10.1038/s41586-022-05366-w] |
938.5 GB | 2.43 - 3.69 Å |
| 2024-02-28 |  |
Sulfolobus acidocaldarius s-layer SlaA cryoET dataset [multiple data sets in MRC format] | Gambelli L, McLaren MJ, Sanders K, Gaines M, Clark L, Gold VAM, Kattnig D, Sikora M, Hanus C, Isupov M, Daum B [Pubmed: 38251732] [DOI: 10.7554/eLife.84617] |
945.1 GB | 11.2 Å |
| 2018-05-11 |  |
T. acidophilum 20S proteasome core movies obtained using Talos Arctica operating at 200 kV equipped with a K2 – image shift used for exposure target navigation [262 multi-frame micrographs composed of 68 frames each in MRC format] | Herzik Jr MA, Wu M, Lander GC [Pubmed: 28991891] [DOI: 10.1038/nmeth.4461] |
945.5 GB | 3.3 Å |
| 2020-10-16 |  |
E. coli 50S ribosome bound to compound 47 [2568 multi-frame micrographs composed of 53 frames each in TIFF format] | Pellegrino J, Lee DJ, Fraser JS, Seiple IB [Pubmed: 32968273] [DOI: 10.1038/s41586-020-2761-3] |
947.9 GB | 2.5 Å |
| 2023-07-10 |  |
Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide [multiple data sets in TIFF format] | Leroy EC, Perry TN, Renault TT, Innis CA [Pubmed: 37322159] [DOI: 10.1038/s41589-023-01343-0] |
948.5 GB | 2.7 Å |
| 2024-02-29 |  |
Cryo electron microscopy of assemblies based on truncated PVY coat protein with K176C mutation [9480 multi-frame micrographs composed of 32 frames each in TIFF format] | Kavcic L, Kezar A [Pubmed: 38233506] [DOI: 10.1038/s42004-024-01100-x] |
957.1 GB | 2.99 - 3.16 Å |
| 2023-08-11 |  |
Single particle cryo-EM dataset of Mus musculus mitochondrial complex I bound with inhibitor Piericidin A [1565 multi-frame micrographs composed of 40 frames each in MRC format] | Grba DN, Chung I, Bridges HR, Agip AA, Hirst J [Pubmed: 37531432] [DOI: 10.1126/sciadv.adi1359] |
960.0 GB | 2.84 Å |
| 2023-10-13 |  |
CryoEM micrographs collected on a RAD51-ATP-dsDNA filament sample [3850 multi-frame micrographs composed of 40 frames each in TIFF format] | Appleby R, Bollschweiler D, Chirgadze DY, Joudeh L, Pellegrini L [Pubmed: 37216117] [DOI: 10.1016/j.isci.2023.106689] |
960.3 GB | 2.9 Å |
