Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2022-03-21 |  |
Structure of the GPCR dimer Ste2 bound to an antagonist [15751 multi-frame micrographs composed of 59 frames each in TIFF format] | Velazhahan V, Tate CG [Pubmed: 35296853] [DOI: 10.1038/s41586-022-04498-3] |
4.1 TB | 2.7 Å |
| 2022-03-21 |  |
Structure of the ligand-free GPCR dimer Ste2 [9369 multi-frame micrographs composed of 53 frames each in EER format] | Velazhahan V, Tate CG [Pubmed: 35296853] [DOI: 10.1038/s41586-022-04498-3] |
8.2 TB | 3.1 Å |
| 2022-03-21 |  |
Structure of the agonist-bound GPCR dimer Ste2 [6944 multi-frame micrographs composed of 50 frames each in MRC format] | Velazhahan V, Tate CG [Pubmed: 35296853] [DOI: 10.1038/s41586-022-04498-3] |
1.3 TB | 3.46 - 3.53 Å |
| 2022-08-12 |  |
Staphylococcal self-loading helicases couple the staircase mechanism with inter domain high flexibility [3121 multi-frame micrographs composed of 40 frames each in TIFF format] | Qiao C, Debiasi-Anders G, Mir-Sanchis I [Pubmed: 35871290] [DOI: 10.1093/nar/gkac625] |
395.0 GB | 3.14 Å |
| 2022-07-18 |  |
Staphylococcal self-loading helicases couple the staircase mechanism with inter domain high flexibility [3765 multi-frame micrographs composed of 40 frames each in TIFF format] | Qiao QCC, Mir Sanchis IMS [Pubmed: 35871290] [DOI: 10.1093/nar/gkac625] |
467.6 GB | 3.1 - 3.3 Å |
| 2022-06-17 |  |
Cryo electron micrographs of Tetrahymena thermophila solubilized mitochondrial membrane complexes - Glacios data [multiple data sets in TIFF and MRC formats] | Letts JA, Zhou L, Guo F [Pubmed: 35357889] [DOI: 10.1126/science.abn7747] |
9.9 TB | 3.02 Å |
| 2021-12-14 |  |
Identifying long-range synaptic inputs using genetically encoded labels and volume electron microscopy [6 multi-frame micrographs composed of 1 frames each in TIFF format] | Ayuso-Jimeno IP, Ronchi P, Wang T, Gallori CE, Gross CT [Pubmed: 35715545] [DOI: 10.1038/s41598-022-14309-4] |
68.7 GB | — |
| 2022-01-18 |  |
New insights into the architecture and dynamics of archaella [2759 multi-frame micrographs composed of 39 frames each in MRC format] | Gambelli L, Isupov MN, Conners R, McLaren M, Bellack A, Gold V, Rachel R, Daum B [Pubmed: 35132062] [DOI: 10.1038/s41467-022-28337-1] |
3.3 TB | 3.08 Å |
| 2022-01-12 |  |
In vivo architecture of the polar organizing protein Z (PopZ) meshwork in the Alphaproteobacteria Magnetospirillum gryphiswaldense and Caulobacter crescentus [multiple data sets in MRC format] | Toro-Nahuelpan M, Plitzko JM, Schüler D, Pfeiffer D [Pubmed: 34971672] [DOI: 10.1016/j.jmb.2021.167423] |
6.4 GB | — |
| 2022-01-18 |  |
Single-particle cryoEM data of yeast Ubr1-Ubc2-Ub-N-degron complex (initiation) [10932 multi-frame micrographs composed of 40 frames each in TIFF format] | Pan M, Zhao M [Pubmed: 34789879] [DOI: 10.1038/s41586-021-04097-8] |
5.7 TB | 3.35 Å |
| 2022-01-12 |  |
CryoEM of Mycobacterium tuberculosis WT RNAP holoenzyme/RbpA/Fdx [401 multi-frame micrographs composed of 50 frames each in TIFF format] | Boyaci H, Chen J, Darst SA, Campbell EA [Pubmed: 29480804] [DOI: 10.7554/eLife.34823] |
220.5 GB | 3.38 Å |
| 2022-01-14 |  |
Motion corrected micrographs - purified SINV/EEEV particles and recombinant anti-EEEV Fab (EEEV-143) [3535 micrographs in MRC format] | Williamson LE, Gilliland T, Yadav PK, Binshtein E, Bombardi R, Kose N, Nargi RS, Sutton RE, Durie CL, Armstrong E, Carnahan RH, Walker LM, Kim AS, Fox JM, Diamond MS, Ohi MD, Klimstra WB, Crowe JE [Pubmed: 33301709] [DOI: 10.1016/j.cell.2020.11.011] |
187.5 GB | 8.3 Å |
| 2022-01-21 |  |
Tilt series of EIAV CASPNC VLPs acquired on Krios G4 with Selectris X and Falcon 4 [multiple data sets in EER and MRC formats] | Obr M, Hagen WJ, Dick RA, Yu L, Kotecha A, Schur FK [Pubmed: 35351542] [DOI: 10.1016/j.jsb.2022.107852] |
461.4 GB | 2.9 - 3.4 Å |
| 2022-01-12 |  |
Motion corrected micrographs - purified SINV/EEEV particles and recombinant anti-EEEV Fab (EEEV-33) [2111 micrographs in MRC format] | Williamson LE, Gilliland Jr T, Yadav PK, Binshtein E, Bombardi R, Kose N, Nargi RS, Sutton RE, Durie CL, Armstrong E, Carnahan RH, Walker LM, Kim AS, Fox JM, Diamond MS, Ohi MD, Klimstra WB, Crowe Jr JE [Pubmed: 33301709] [DOI: 10.1016/j.cell.2020.11.011] |
111.8 GB | 7.24 Å |
| 2022-05-25 |  |
SARS-CoV-2 spike protein S:D614G + S:A222V variant [4841 micrographs in MRC format] | Ginex T, Marco-Marín C, Wieczór M, Mata CP, Krieger J, Ruiz-Rodriguez P, López-Redondo ML, Francés-Gómez C, Melero R, Sánchez-Sorzano CÓ, Martínez M, Gougeard N, Forcada-Nadal A, Zamora-Caballero S, Gozalbo-Rovira R, Sanz-Frasquet C, Arranz R, Bravo J, Rubio V, Marina A, Geller R, Comas I, Gil C, Coscolla M, Orozco M, Llácer JL, Carazo JM [Pubmed: 35816514] [DOI: 10.1371/journal.ppat.1010631] |
303.8 GB | 3.4 Å |
| 2022-05-11 |  |
Cryo-EM SPA dataset of Megadalton-range protein communities from a Chaetomium thermophilum native cell extract [2808 multi-frame micrographs composed of 13 frames each in MRC format] | Skalidis IS, Kyrilis FLK, Tüting CT, Müller JM, Sorokina MS, Hamdi FH, Sadian YS, Chojnowski GC, Kastritis PLK [Pubmed: 34836937] [DOI: 10.1038/s41467-021-27287-4] |
1.1 TB | 3.84 - 4.52 Å |
| 2022-01-12 |  |
Motion corrected micrographs - purified Dot/Icm T4SS particles [3590 micrographs in MRC format] | Durie CL, Sheedlo MJ, Chung JM, Byrne BG, Su M, Knight T, Swanson M, Lacy DB, Ohi MD [Pubmed: 32876045] [DOI: 10.7554/eLife.59530] |
190.4 GB | 3.7 Å |
| 2022-01-18 |  |
Single-particle cryoEM data of a ternary KRas(G13D)-SOS complex [6295 multi-frame micrographs composed of 50 frames each in TIFF format] | Liu C, Zhao M [Pubmed: 33723061] [DOI: 10.1073/pnas.2022403118] |
3.7 TB | 3.47 Å |
| 2022-07-12 |  |
C2-symmetric single-particle cryo-EM map of T. vaginalis FDPF3 - unaligned multi-frame micrographs [stack of 7398 particles in TIFF format] | Bell TA [Pubmed: 35780837] [DOI: 10.1016/j.jbc.2022.102210] |
1.4 TB | 6.6 - 6.8 Å |
| 2022-01-12 |  |
CryoEM of Mycobacterium tuberculosis WT RNAP holoenzyme/RbpA [1381 multi-frame micrographs composed of 50 frames each in TIFF format] | Boyaci H, Chen J, Darst SA, Campbell EA [Pubmed: 29480804] [DOI: 10.7554/eLife.34823] |
838.9 GB | 3.38 Å |
| 2022-01-17 |  |
CryoEM of Mycobacterium tuberculosis WT RNAP holoenzyme/RbpA bound to an inhibitor corallopyronin and us-fork DNA [multiple data sets in TIFF format] | Boyaci H, Chen J, Darst SA, Campbell EA [Pubmed: 30626968] [DOI: 10.1038/s41586-018-0840-5] |
2.3 TB | 3.55 Å |
| 2022-01-12 |  |
Cryo-electron tilt series of mouse stereocilia [552 tilt series in MRC format] | Elferich J, Clark S, Ge J, Goehring A, Matsui A, Gouaux E [Pubmed: 34964715] [DOI: 10.7554/eLife.74512] |
1.9 TB | — |
| 2022-01-28 |  |
CryoEM of Mycobacterium tuberculosis WT RNAP holoenzyme/RbpA bound to an inhibitor corallopyronin and de novo melted AP3 promoter DNA [multiple data sets in TIFF format] | Boyaci H, Chen J, Jansen R, Darst SA, Campbell EA [Pubmed: 30626968] [DOI: 10.1038/s41586-018-0840-5] |
1.8 TB | 3.55 Å |
| 2022-01-28 |  |
CryoEM of Mycobacterium tuberculosis WT RNAP holoenzyme/RbpA bound to the de novo melted AP3 promoter DNA [8579 multi-frame micrographs composed of 50 frames each in MRC format] | Boyaci H, Chen J, Jansen R, Darst SA, Campbell EA [Pubmed: 30626968] [DOI: 10.1038/s41586-018-0840-5] |
1.8 TB | — |
| 2022-01-28 |  |
CryoEM of Mycobacterium tuberculosis WT RNAP holoenzyme/RbpA bound to the Fdx and upstream fork DNA [multiple data sets in MRC format] | Boyaci H, Chen J, Lilic M, Palka M, Mooney RA, Landick R, Darst SA, Campbell EA [Pubmed: 29480804] [DOI: 10.7554/eLife.34823] |
2.0 TB | 3.38 Å |
