Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2021-11-15 |  |
Apoferritin 1.7% glycerol, 200kV [1707 multi-frame micrographs composed of 113 frames each in TIFF format] | Basanta B, Hirschi M, Lander GC [Pubmed: 34981768] [DOI: 10.1107/S2059798321012110] |
708.2 GB | 2.3 Å |
| 2025-03-04 |  |
PSI-FCPI of the diatom Thalassiosira pseudonana CCMP1335 [8950 multi-frame micrographs composed of 50 frames each in TIFF format] | Kato K, Nagao R, Nakajima Y, Shen JR [Pubmed: 39480899] [DOI: 10.7554/eLife.99858] |
1.7 TB | 2.3 Å |
| 2022-07-26 |  |
Cryo-EM of recombinant Goslar chimallin [2889 multi-frame micrographs composed of 44 frames each in TIFF format] | Laughlin TG, Deep A, Prichard AM, Seitz C, Gu Y, Enustun E, Suslov S, Khanna K, Birkholz EA, Armbruster E, McCammon JA, Amaro RE, Pogliano J, Corbett KD, Villa E [Pubmed: 35922510] [DOI: 10.1038/s41586-022-05013-4] |
432.9 GB | 2.3 - 4.0 Å |
| 2022-04-01 |  |
2.3 A structure of the ATP-dependent chromatin remodeler Chd1 bound to the nucleosome in a nucleotide-free state [multiple data sets in TIFF, MRC and MRCS formats] | Nodelman IM, Das S, Faustino AM, Fried SD, Bowman GD, Armache JP [Pubmed: 35173352] [DOI: 10.1038/s41594-021-00719-x] |
4.7 TB | 2.3 - 2.9 Å |
| 2021-03-12 |  |
Beta-galactosidase in complex with deoxygalacto-nojirimycin [598 multi-frame micrographs composed of 75 frames each in TIFF format] | Saur M, Hartshorn MJ, Dong J, Reeks J, Bunkoczi G, Jhoti H, Williams PA [Pubmed: 31877353] [DOI: 10.1016/j.drudis.2019.12.006] |
765.8 GB | 2.3 Å |
| 2021-03-12 |  |
Beta-galactosidase in complex with L-ribose [517 multi-frame micrographs composed of 75 frames each in TIFF format] | Saur M, Hartshorn MJ, Dong J, Reeks J, Bunkoczi G, Jhoti H, Williams PA [Pubmed: 31877353] [DOI: 10.1016/j.drudis.2019.12.006] |
669.1 GB | 2.3 Å |
| 2023-06-30 |  |
E. coli 50S ribosome bound to SLC17 [multiple data sets in MRC and TIFF formats] | Seiple IB, Pellegrino J, Fraser JS, Lee DJ | 1.5 TB | 2.3 Å |
| 2025-03-17 |  |
Cryo electron structure of the ectodomain of SPRING bound to the ectodomain of Site-one protease [4886 multi-frame micrographs composed of 50 frames each in TIFF format] | Kober DL [Pubmed: 38977690] [DOI: 10.1038/s41467-024-50068-8] |
2.9 TB | 2.3 Å |
| 2025-04-07 |  |
Cryo-EM Structures of human LINE-1 ORF2p target-primed reverse transcription complex [multiple data sets in TIFF and MRCS formats] | Ghanim GEG [Pubmed: 40048554] [DOI: 10.1126/science.ads8412] |
5.1 TB | 2.3 - 3.1 Å |
| 2023-08-18 |  |
Movies of GroEL-ES-nucleotide complex plunged 13, 50, 200 ms and 20 s after mixing with ATP [multiple data sets in TIFF format] | Torino S, Dhurandhar M, Stroobants A, Claessens R, Efremov RG [DOI: 10.1038/s41592-023-01967-z] |
2.9 TB | 2.3 - 7.1 Å |
| 2025-06-19 |  |
CRISPR-associated transposon post-transposition complex preliminary micrographs [1717 multi-frame micrographs composed of 40 frames each in MRC format] | Tenjo-Castaño F, Sofos N, Stutzke LS, Temperini P, Fuglsang A, Pape T, Mesa P, Montoya G [Pubmed: 38834066] [DOI: 10.1016/j.molcel.2024.05.005] |
1.2 TB | 2.3 Å |
| 2025-06-30 |  |
CRISPR-associated transposon post-transposition complex preliminary micrographs [1717 multi-frame micrographs composed of 40 frames each in MRC format] | Tenjo-Castaño F, Sofos N, Stutzke LS, Temperini P, Fuglsang A, Pape T, Mesa P, Montoya G [Pubmed: 38834066] [DOI: 10.1016/j.molcel.2024.05.005] |
3.4 TB | 2.3 Å |
| 2024-11-12 |  |
Cryo electron micrographs of Plastid-encoded RNA polymerase (PEP) from Sinapis alba [21347 multi-frame micrographs composed of 50 frames each in TIFF format] | Webster MW [Pubmed: 38428394] [DOI: 10.1016/j.cell.2024.01.036] |
4.5 TB | 2.3 - 2.9 Å |
| 2020-12-02 |  |
Apoferritin tilt series and frame series used to benchmark the resolution of both data types in M [multiple data sets in TIFF format] | Tegunov D, Xue L, Dienemann C, Cramer P, Mahamid J [Pubmed: 33542511] [DOI: 10.1038/s41592-020-01054-7] |
39.6 GB | 2.3 Å |
| 2025-04-24 |  |
Yeast P complex spliceosome [multiple data sets in TIFF format] | Wilkinson ME, Hoskins AA [Pubmed: 39688371] [DOI: 10.7554/eLife.100449] |
7.0 TB | 2.31 - 3.72 Å |
| 2024-12-04 |  |
Cryo electron micrographs of Coxsackievirus A9 bound with compound 14 (CL275) [567 multi-frame micrographs composed of 40 frames each in MRC format] | Plavec Z, Mitchell C, Buckner C, Butcher SJ [Pubmed: 39292620] [DOI: 10.1021/acs.jmedchem.4c00701] |
340.9 GB | 2.31 Å |
| 2024-08-11 |  |
Alligator haemoglobin in oxy form [multiple data sets in TIFF format] | Takahashi K, Lee Y, Nishizawa T, Tame JRH [Pubmed: 39090102] [DOI: 10.1038/s41467-024-49947-x] |
2.6 TB | 2.31 Å |
| 2020-05-26 |  |
2.3 Angstrom cryo-EM reconstructions of HemQ from Geobacillus [258 multi-frame micrographs composed of 100 frames each in MRCS format] | Bromberg R, Guo Y, Borek D, Otwinowski Z [DOI: 10.1107/S2052252520002444] |
1.4 TB | 2.32 Å |
| 2023-06-30 |  |
E. coli 50S ribosome bound to SLC21 [multiple data sets in MRC and TIFF formats] | Seiple IB, Pellegrino J, Fraser JS, Lee DJ | 1.6 TB | 2.32 Å |
| 2023-06-30 |  |
E. coli 50S ribosome bound to SLC26 [multiple data sets in MRC and TIFF formats] | Seiple IB, Pellegrino J, Fraser JS, Lee DJ | 2.3 TB | 2.32 Å |
| 2025-02-03 |  |
E.coli DNA gyrase in complex with 217 bp substrate DNA (chirally wrapped state) [8508 multi-frame micrographs composed of 40 frames each in TIFF format] | Michalczyk E., Pakosz-Stepien Z, Liston J., Gittins O., Liston J.D., Pabis M., Heddle J.G., Ghilarov D. | 3.4 TB | 2.32 Å |
| 2023-08-18 |  |
Initiation complex consisting of E. coli 70S ribosome with AAA mRNA codon in the A-site incubated with a ternary complex containing cognate acylated tRNA(Lys) [8435 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Glatt S [Pubmed: 37553384] [DOI: 10.1038/s41467-023-40422-7] |
3.2 TB | 2.33 - 2.88 Å |
| 2024-07-11 |  |
Unaligned multi-frame micrographs of SARS-CoV-2 Nsp15 in apo form and in complex with poly(U)-containing dsRNA [22419 multi-frame micrographs composed of 2051 frames each in EER format] | Ito F, Yang H, Zhou ZH, Chen XS [Pubmed: 38613382] [DOI: 10.1093/procel/pwae009] |
24.5 TB | 2.33 - 3.25 Å |
| 2025-06-05 |  |
Single particle cryoEM data of spinach cytochrome b6f with inhibitor DBMIB bound in quinol oxidation site (Qp) [3027 multi-frame micrographs composed of 40 frames each in TIFF format] | Pintscher S, Pietras R, Mielecki B, Indyka P, Rawski M, Koziej L, Jaciuk M, Wazny G, Glatt S, Osyczka A [Pubmed: 39362993] [DOI: 10.1038/s41477-024-01804-x] |
1.1 TB | 2.33 Å |
| 2023-09-26 |  |
Single particle cryo-EM dataset of human nucleolar and nuclear pre-60S assembly intermediates [multiple data sets in TIFF and MRCS formats] | Vanden Broeck A, Klinge S [Pubmed: 37410842] [DOI: 10.1126/science.adh3892] EMD-29104 EMD-29252 EMD-29105 EMD-29253 EMD-29106 EMD-29254 EMD-29107 EMD-29255 EMD-29108 EMD-29256 EMD-29109 EMD-29257 EMD-29110 EMD-29258 EMD-29111 EMD-29259 EMD-29112 EMD-29260 EMD-29113 EMD-29261 EMD-29114 EMD-29262 EMD-29115 EMD-29263 EMD-29130 EMD-29131 EMD-29132 EMD-29133 EMD-29134 EMD-29135 EMD-29136 EMD-29137 EMD-29138 EMD-29139 EMD-29140 EMD-29141 EMD-29142 EMD-29128 EMD-29129 EMD-29143 EMD-29144 EMD-29145 EMD-29146 EMD-29147 EMD-29148 EMD-29149 EMD-29150 EMD-29151 EMD-29152 EMD-29153 EMD-29154 EMD-29155 EMD-29156 EMD-29157 EMD-29158 EMD-29159 EMD-29160 EMD-29161 EMD-29162 EMD-29163 EMD-29164 EMD-29165 EMD-29166 EMD-29167 EMD-29168 EMD-29169 EMD-29170 EMD-29171 EMD-29173 EMD-29174 EMD-29175 EMD-29176 EMD-29177 EMD-29178 EMD-29179 EMD-29180 EMD-29181 EMD-29182 EMD-29183 EMD-29184 EMD-29185 EMD-29186 EMD-29187 EMD-29188 EMD-29189 EMD-29192 EMD-29194 EMD-29193 EMD-29116 EMD-29265 EMD-29117 EMD-29266 EMD-29118 EMD-29267 EMD-29119 EMD-29268 EMD-29120 EMD-29269 EMD-29121 EMD-29271 EMD-29122 EMD-29272 EMD-29123 EMD-29273 EMD-29124 EMD-29274 EMD-29125 EMD-29275 EMD-29126 EMD-29276 EMD-29127 EMD-29277 EMD-29195 EMD-29196 EMD-29197 EMD-29198 EMD-29199 EMD-29200 EMD-29201 EMD-29202 EMD-29204 EMD-29205 EMD-29206 |
140.5 TB | 2.33 - 3.75 Å |
