Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2024-06-17 |  |
CryoEM movies of nitrogenase (MoFeP + FeP) from Azotobacter vinelandii under catalytic turnover conditions [multiple data sets in TIFF and MRC formats] | Rutledge HL, Cook BD, Nguyen HPM, Tezcan FA, Herzik Jr MA [Pubmed: 35901182] [DOI: 10.1126/science.abq7641] |
4.9 TB | 2.34 - 3.01 Å |
| 2021-11-10 |  |
Structural mechanism of GTPase-powered ribosome-tRNA movement [multiple data sets in MRC and MRCS formats] | Petrychenko V, Peng B-Z, Schwarzer AP, Peske F, Rodnina MV, Fischer N [Pubmed: 34635670] [DOI: 10.1038/s41467-021-26133-x] |
987.5 GB | 2.35 - 9.5 Å |
| 2023-06-29 |  |
E. coli 50S ribosome bound to compound streptogramin analogs SA1 and SB1 [multiple data sets in TIFF and MRC formats] | Seiple IB, Pellegrino J, Fraser JS, Lee DJ | 1.3 TB | 2.35 Å |
| 2023-06-29 |  |
E. coli 50S ribosome bound to D-linker solithromycin conjugate [multiple data sets in TIFF and MRC formats] | Seiple IB, Pellegrino J, Fraser JS, Lee DJ | 1.2 TB | 2.35 Å |
| 2022-03-14 |  |
Movies of a photosynthetic reaction centre - double light-harvesting 1 complex from the bacterium G. phototrophica [19815 multi-frame micrographs composed of 20 frames each in MRCS format] | Qian P, Gardiner AT, Šímová I, Naydenova K, Croll TI, Jackson PJ, Nupur N, Kloz M, Čubáková P, Kuzma M, Zeng Y, Castro-Hartmann P, van Knippenberg B, Goldie KN, Kaftan D, Hrouzek P, Hájek J, Agirre J, Siebert CA, Bína D, Sader K, Stahlberg H, Sobotka R, Russo CJ, Polívka T, Hunter CN, Koblížek M [Pubmed: 35171663] [DOI: 10.1126/sciadv.abk3139] |
6.6 TB | 2.35 - 2.5 Å |
| 2024-08-14 |  |
Human haemoglobin in deoxy form [multiple data sets in TIFF format] | Takahashi K, Lee Y, Nishizawa T, Tame JRH [Pubmed: 39090102] [DOI: 10.1038/s41467-024-49947-x] |
2.7 TB | 2.35 Å |
| 2023-02-17 |  |
Principles of mitoribosomal small subunit assembly in eukaryotes [multiple data sets in TIFF format] | Harper NJ, Burnside C, Klinge S [Pubmed: 36482135] [DOI: 10.1038/s41586-022-05621-0] |
73.6 TB | 2.36 - 3.8 Å |
| 2023-02-27 |  |
CryoEM micrographs of mouse apoferritin in a range of ice thicknesses on different microscope setups [multiple data sets in MRC and TIFF formats] | Neselu K, Wang B, Rice WJ, Potter CS, Carragher B, Chua EYD [Pubmed: 36742017] [DOI: 10.1016/j.yjsbx.2023.100085] |
5.7 TB | 2.36 - 10.18 Å |
| 2025-06-26 |  |
Cryo-EM SPA dataset of stably reduced Streptococcus pneumoniae NADPH oxidase with NADH [28120 multi-frame micrographs composed of 938 frames each in EER format] | Dubach VRA, San Segundo-Acosta P, Murphy BJ [Pubmed: 39039317] [DOI: 10.1038/s41594-024-01348-w] |
11.1 TB | 2.36 Å |
| 2024-09-03 |  |
ATTRG47E amyloid fibrils from hereditary ATTR amloidosis [12067 multi-frame micrographs composed of 2226 frames each in EER format] | Steinebrei M, Schmidt M, Fändrich M [Pubmed: 37993462] [DOI: 10.1038/s41467-023-43301-3] |
6.8 TB | 2.3673 Å |
| 2023-08-18 |  |
Initiation complex consisting of E. coli 70S ribosome with m6AAA mRNA codon in the A-site incubated with a ternary complex containing cognate acylated tRNA(Lys) [9366 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Glatt S [Pubmed: 37553384] [DOI: 10.1038/s41467-023-40422-7] |
3.3 TB | 2.37 - 2.85 Å |
| 2025-06-27 |  |
CryoEM movies of human hemoglobin (Hb) in the presence of 25 uM sodium dithionite under Al's oil [multiple data sets in EER and MRC formats] | Cook BD, Herzik Jr MA [Pubmed: 40229244] [DOI: 10.1038/s41467-025-58243-1] |
1.9 TB | 2.37 - 2.55 Å |
| 2025-06-30 |  |
CryoEM movies of human hemoglobin (Hb) in the presence of 5 mM sodium dithionite under Al's oil [multiple data sets in EER and MRC formats] | Cook BD, Herzik Jr MA [Pubmed: 40229244] [DOI: 10.1038/s41467-025-58243-1] |
1.2 TB | 2.37 - 2.52 Å |
| 2021-03-05 |  |
Movies of a heptameric light-harvesting 2 complex from the marine purple bacterium Mch. purpuratum [9543 multi-frame micrographs composed of 42 frames each in MRCS format] | Gardiner AT, Naydenova K, Castro-Hartmann P, Nguyen-Phan TC, Russo CJ, Sader K, Hunter CN, Cogdell RJ, Qian P [Pubmed: 33579696] [DOI: 10.1126/sciadv.abe4650] |
6.0 TB | 2.38 Å |
| 2023-06-29 |  |
E. coli 50S ribosome bound to streptogramin A analog 3146 [multiple data sets in MRC and TIFF formats] | Pellegrino J, Seiple IB, Fraser JS, Lee DJ | 2.1 TB | 2.38 Å |
| 2023-10-10 |  |
EM ladder: four-species cryoEM protein mix for workflow and algorithm benchmarking: Apoferritin, beta-galactosidase, PP7 VLPs and TMV [1862 micrographs in MRC format] | Bobe D, Eng E, Kopylov M | 98.7 GB | 2.38 - 3.36 Å |
| 2023-08-18 |  |
Single particle cryo-EM dataset of Mus musculus mitochondrial complex I [2674 multi-frame micrographs composed of 40 frames each in TIFF format] | Grba DN, Chung I, Bridges HR, Agip AA, Hirst J [Pubmed: 37531432] [DOI: 10.1126/sciadv.adi1359] |
1.1 TB | 2.39 Å |
| 2024-03-18 |  |
Mycobacterium phage Che8 mutant capsid (gene 110 deletion) [8118 multi-frame micrographs composed of 30 frames each in TIFF format] | Podgorski JM, White SJ | 2.2 TB | 2.39 Å |
| 2023-08-18 |  |
Structure of TDP-43 amyloid filaments from type A FTLD-TDP (individual 2) [33336 multi-frame micrographs composed of 40 frames each in TIFF format] | Arseni D, Ryskeldi-Falcon B [Pubmed: 37532939] [DOI: 10.1038/s41586-023-06405-w] |
5.3 TB | 2.39 Å |
| 2023-08-18 |  |
Structure of TDP-43 amyloid filaments from type A FTLD-TDP (individual 3) [36507 multi-frame micrographs composed of 40 frames each in TIFF format] | Arseni D, Ryskeldi-Falcon B [Pubmed: 37532939] [DOI: 10.1038/s41586-023-06405-w] |
5.7 TB | 2.39 Å |
| 2023-09-22 |  |
Structure of TDP-43 amyloid filaments from type A FTLD-TDP (individual 1) [91457 multi-frame micrographs composed of 40 frames each in TIFF format] | Arseni D, Ryskeldi-Falcon B [Pubmed: 37532939] [DOI: 10.1038/s41586-023-06405-w] |
14.5 TB | 2.39 Å |
| 2025-06-30 |  |
CryoEM movies of the catalytic subunit of Mo-nitrogenase (MoFeP) from Azotobacter vinelandii [multiple data sets in EER and MRC formats] | Cook BD, Herzik Jr MA [Pubmed: 40229244] [DOI: 10.1038/s41467-025-58243-1] |
1.6 TB | 2.39 - 2.51 Å |
| 2024-06-04 |  |
Taf15, TMEM106B and Aß42 amyloid filaments - Individual 4, brainstem [4682 multi-frame micrographs composed of 21 frames each in TIFF format] | Tetter S, Arseni D, Murzin AG, Buhidma Y, Peak-Chew SY, Garringer HJ, Newell KL, Vidal R, Apostolova LG, Lashley T, Ghetti B, Ryskeldi-Falcon B [Pubmed: 38057661] [DOI: 10.1038/s41586-023-06801-2] |
435.6 GB | 2.39 - 3.7 Å |
| 2023-06-02 |  |
Mycobacterium phage Patience [8640 multi-frame micrographs composed of 30 frames each in TIFF format] | Podgorski JM | 2.2 TB | 2.39 Å |
| 2024-05-20 |  |
Structure of an ALYREF-exon junction complex hexamer [multiple data sets in EER and MRC formats] | Pacheco-Fiallos B, Vorländer MK, Plaschka C [Pubmed: 37020021] [DOI: 10.1038/s41586-023-05904-0] |
6.6 TB | 2.4 Å |
