오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
Release date | Imageset | Title | Authors and references | Size | Resolution |
---|---|---|---|---|---|
2021-04-06 | Cryo-EM structure of the ternary Netrin 1-Neogenin 1-Repulsive Guidance Molecule B complex [1635 multi-frame micrographs composed of 40 frames each in TIFF format] | Robinson RA, Griffiths SC, van de Haar LL, Malinauskas T, van Battum EY, Zelina P, Schwab RA, Karia D, Malinauskaite L, Brignani S, van den Munkhof M, Dudukcu O, De Ruiter AA, Van den Heuvel DMA, Bishop B, Elegheert J, Aricescu AR, Pasterkamp RJ, Siebold C [Pubmed: 33740419] [DOI: 10.1016/j.cell.2021.02.045] |
1.2 TB | 5.98 Å | |
2022-03-01 | Cryo electron microscopy of single particles of the Haliangium ochraceum Encapsulin:encapsulated ferritin encapsulin nano compartment [8109 multi-frame micrographs composed of 40 frames each in TIFF format] | Ross J, Baslé A, Clarke DJ, Marles-Wright J [Pubmed: 35080974] [DOI: 10.1126/sciadv.abj4461] |
1.7 TB | 2.4 - 3.5 Å | |
2023-07-28 | Cryo-EM Motion Corrected Micrographs of Human Prothrombin:Prothrombinase [10217 micrographs in MRC format] | Ruben EA, Summers B, Rau MJ, Fitzpatrick JAJ, Di Cera E [Pubmed: 35427420] [DOI: 10.1182/blood.2022015807] |
3.5 TB | 4.1 Å | |
2020-05-14 | Three-dimensional ultrastructure of Plasmodium falciparum throughout cytokinesis [multiple data sets in MRC and TIFF formats] | Rudlaff RM, Kraemer S, Marshman J, Dvorin JD [Pubmed: 32511279] [DOI: 10.1371/journal.ppat.1008587] |
3.9 GB | — | |
2015-06-04 | Raw data for the 3D structure of horse spleen apoferritin determined by electron cryomicroscopy [multiple data sets in MRC format] | Russo CJ, Passmore LA [Pubmed: 25504723] [DOI: 10.1126/science.1259530] |
180.0 GB | 4.7 Å | |
2018-01-03 | Structure of the Z-disk isolated from the indirect flight muscle of the honey bee [96 class averages in MRC format] | Rusu M, Hu Z, Taylor KA, Trinick J [Pubmed: 28733815] [DOI: 10.1007/s10974-017-9477-5] |
3.0 GB | 60.0 Å | |
2024-01-15 | CryoEM movies of nitrogenase (MoFeP + FeP) from Azotobacter vinelandii under catalytic turnover conditions with inhibitor BeFx [multiple data sets in MRC format] | Rutledge HL, Cook BD, Nguyen HPM, Tezcan FA, Herzik Jr MA [Pubmed: 35901182] [DOI: 10.1126/science.abq7641] |
1.7 TB | 2.4 Å | |
2024-04-12 | Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I) [10381 multi-frame micrographs composed of 39 frames each in MRC format] | Rybak MY, Gagnon MG [Pubmed: 38538914] [DOI: 10.1038/s41594-024-01236-3] |
7.2 TB | 2.9 Å | |
2024-04-12 | Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the near-cognate AUG codon (Structure II) [10734 multi-frame micrographs composed of 20 frames each in MRC format] | Rybak MY, Gagnon MG [Pubmed: 38538914] [DOI: 10.1038/s41594-024-01236-3] |
4.1 TB | 3.1 Å | |
2024-04-12 | Escherichia coli 70S ribosome in complex with A-site tRNAIle(LAU) bound to the cognate AUA codon (Structure III) [13536 multi-frame micrographs composed of 39 frames each in MRC format] | Rybak MY, Gagnon MG [Pubmed: 38538914] [DOI: 10.1038/s41594-024-01236-3] |
9.4 TB | 2.8 Å | |
2024-04-12 | Escherichia coli 70S ribosome in complex with P-site tRNAIle(LAU) bound to the cognate AUA codon (Structure IV) [9711 multi-frame micrographs composed of 39 frames each in MRC format] | Rybak MY, Gagnon MG [Pubmed: 38538914] [DOI: 10.1038/s41594-024-01236-3] |
6.8 TB | 3.1 Å | |
2023-11-07 | Tau filaments from the cellular fraction of Alzheimer's disease patient brain [12117 multi-frame micrographs composed of 40 frames each in TIFF format] | Ryskeldi-Falcon BR-F, Behr TSB [Pubmed: 37163117] [DOI: 10.1101/2023.04.30.537820] |
1.9 TB | 3.27 Å | |
2020-08-18 | CryoEM structure of human CMG bound to AND-1 (CMGA) [1844 multi-frame micrographs composed of 23 frames each in MRC format] | Rzechorzek NJ, Hardwick SW, Chirgadze DY, Pellegrini L [Pubmed: 32453425] [DOI: 10.1093/nar/gkaa429] |
1.3 TB | 6.77 Å | |
2020-08-18 | CryoEM structure of human CMG bound to ATPgammaS and DNA [3694 multi-frame micrographs composed of 40 frames each in MRC format] | Rzechorzek NJ, Pellegrini L [Pubmed: 32453425] [DOI: 10.1093/nar/gkaa429] |
7.7 TB | 3.29 - 3.41 Å | |
2022-07-26 | Micrographs of PI3-kinase SH3 amyloid fibrils [multiple data sets in MRC format] | Röder C, Schröder GF [Pubmed: 31434882] [DOI: 10.1038/s41467-019-11320-8] |
32.0 GB | 3.4 Å | |
2022-07-27 | Micrographs of IAPP (amylin) amyloid fibrils [1330 micrographs in MRC format] | Röder C, Schröder GF [Pubmed: 32541895] [DOI: 10.1038/s41594-020-0442-4] |
83.1 GB | 4.2 - 8.1 Å | |
2023-10-13 | Structure of the peroxisomal Pex1/Pex6 ATPase complex bound to a substrate [multiple data sets in TIFF format] | Rüttermann MR, Koci MK, Lill PL, Geladas EDG, Kaschani FK, Klink BUK, Erdmann RE, Gatsogiannis CG [Pubmed: 37741838] [DOI: 10.1038/s41467-023-41640-9] |
4.9 TB | 4.1 - 4.7 Å | |
2023-06-13 | Cryo-EM SPA dataset of a native lysate fraction from human liver microsomes (fraction #1) [2406 multi-frame micrographs composed of 45 frames each in TIFF format] | SU C.-C. | 1.1 TB | 2.83 - 3.47 Å | |
2023-06-13 | Cryo-EM SPA dataset of a native lysate fraction from human liver microsomes (fraction #2) [8425 multi-frame micrographs composed of 45 frames each in TIFF format] | SU C.-C. | 4.2 TB | 2.64 - 3.24 Å | |
2016-01-20 | SBF-SEM of ring-stage malaria parasite infected red blood cell [120 micrographs in MRC format] | Sakaguchi M, Miyazaki N, Fujioka H, Kaneko O, Murata K [Pubmed: 26772147] [DOI: 10.1016/j.jsb.2016.01.003] |
293.0 MB | — | |
2016-01-20 | SBF-SEM of trophozoite-stage malaria parasite infected red blood cell [110 micrographs in MRC format] | Sakaguchi M, Miyazaki N, Fujioka H, Kaneko O, Murata K [Pubmed: 26772147] [DOI: 10.1016/j.jsb.2016.01.003] |
268.6 MB | — | |
2016-01-20 | SBF-SEM of early schizont-stage malaria parasite infected red blood cell [80 micrographs in MRC format] | Sakaguchi M, Miyazaki N, Fujioka H, Kaneko O, Murata K [Pubmed: 26772147] [DOI: 10.1016/j.jsb.2016.01.003] |
222.1 MB | — | |
2016-01-20 | SBF-SEM of late schizont-stage malaria parasite infected red blood cell [90 micrographs in MRC format] | Sakaguchi M, Miyazaki N, Fujioka H, Kaneko O, Murata K [Pubmed: 26772147] [DOI: 10.1016/j.jsb.2016.01.003] |
219.7 MB | — | |
2022-05-27 | Human Xkr8-Basigin complex bound to Fab fragment [1998 multi-frame micrographs composed of 48 frames each in TIFF format] | Sakuragi T, Tsutsumi A, Kikkawa M, Nagata S [Pubmed: 34625749] [DOI: 10.1038/s41594-021-00665-8] |
451.5 GB | 3.8 Å | |
2020-07-06 | Subnanometer-resolution structure determination in situ by a hybrid subtomogram averaging - single particle cryoEM - workflow - on TMV [4 tilt series in MRC format] | Sanchez RM, Zhang Y, Chen W, Dietrich L, Kudryashev M [Pubmed: 32709843] [DOI: 10.1038/s41467-020-17466-0] |
37.5 GB | 5.24 Å |