오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
Release date | Imageset | Title | Authors and references | Size | Resolution |
---|---|---|---|---|---|
2019-08-07 | Identification of a druggable VP1-VP3 interprotomer pocket in the capsid of enteroviruses [2120 micrographs in MRC format] | Geraets JA, Flatt JW, Domanska A, Butcher SJ [Pubmed: 31185007] [DOI: 10.1371/journal.pbio.3000281] |
2.2 TB | 4.0 Å | |
2021-06-11 | Cas6-reverse transcriptase-Cas1—Cas2 CRISPR integrase complex [3330 multi-frame micrographs composed of 50 frames each in TIFF format] | Hoel CM, Wang JY, Doudna JA, Brohawn SG [Pubmed: 33958590] [DOI: 10.1038/s41467-021-22900-y] |
2.2 TB | 3.4 - 3.9 Å | |
2023-09-08 | Cryo-EM micrographs of HIV-1 Vif bound to human APOBEC3H, CBF-beta, ELOB, ELOC, and N-terminal domain of CUL5 [14766 multi-frame micrographs composed of 49 frames each in TIFF format] | Ito F, Alvarez-Cabrera AL, Kim K, Zhou ZH, Chen XS [Pubmed: 37640699] [DOI: 10.1038/s41467-023-40955-x] |
2.2 TB | 3.24 - 3.54 Å | |
2019-12-20 | Single Particle Cryo-EM Reconstructions of Human FACT in Complex with Partially Assembled Sub-nucleosomes [multiple data sets in TIFF, MRC and MRCS formats] | Liu YL, Zhou KZ, Zhang NZ, Wei HW, Tan YZT, Zhang ZZ, Carragher BC, Potter CSP, D'Arcy SD, Luger KL [Pubmed: 31775157] [DOI: 10.1038/s41586-019-1820-0] |
2.2 TB | 4.9 - 7.4 Å | |
2023-05-17 | Structural basis of GTPase-mediated mitochondrial ribosome biogenesis and recycling - dataset2 [10537 multi-frame micrographs composed of 40 frames each in TIFF format] | Hillen HS [Pubmed: 34135319] [DOI: 10.1038/s41467-021-23702-y] |
2.2 TB | 2.7 - 2.9 Å | |
2022-09-23 | CryoEM structure of the A.aeolicus WzmWzt transporter in the presence of the native O antigen and ATP [8625 multi-frame micrographs composed of 40 frames each in TIFF format] | Spellmon N [Pubmed: 36064941] [DOI: 10.1038/s41467-022-32597-2] |
2.2 TB | 3.3 - 3.5 Å | |
2022-07-18 | Thylakoid-located voltage-dependent chloride channel VCCN1 [multiple data sets in TIFF format] | Hagino T, Kato T, Kasuya G, Kobayashi K, Kusakizako T, Hamamoto S, Sobajima T, Fujiwara Y, Yamashita K, Kawasaki H, Maturana AD, Nishizawa T, Nureki O [Pubmed: 35523970] [DOI: 10.1038/s41467-022-30292-w] |
2.2 TB | 2.7 - 3.0 Å | |
2021-11-15 | CryoEM structure of GABA(A)R-beta3 homopentamer at 3.4A from Tundra, 100kV microscope [4073 multi-frame micrographs composed of 18 frames each in MRC format] | Karia D, Koh AF, Yu L, Kotecha A | 2.2 TB | 3.4 Å | |
2023-06-02 | Mycobacterium phage Patience [8640 multi-frame micrographs composed of 30 frames each in TIFF format] | Podgorski JM | 2.2 TB | 2.39 Å | |
2022-12-09 | S-(+)-ketamine bound GluN1a-GluN2B NMDA receptors at 3.69 Angstrom resolution [multiple data sets in TIFF format] | Chou THC, Furukawa FH [Pubmed: 35637422] [DOI: 10.1038/s41594-022-00772-0] |
2.3 TB | 3.69 Å | |
2022-01-17 | CryoEM of Mycobacterium tuberculosis WT RNAP holoenzyme/RbpA bound to an inhibitor corallopyronin and us-fork DNA [multiple data sets in TIFF format] | Boyaci H, Chen J, Darst SA, Campbell EA [Pubmed: 30626968] [DOI: 10.1038/s41586-018-0840-5] |
2.3 TB | 3.55 Å | |
2023-06-30 | E. coli 50S ribosome bound to SLC26 [multiple data sets in MRC and TIFF formats] | Seiple IB, Pellegrino J, Fraser JS, Lee DJ | 2.3 TB | 2.32 Å | |
2023-01-19 | Cryogenic electron tomographs of Coxsackievirus A9 treated with fatty-acid-free BSA [2472 multi-frame micrographs composed of 30 frames each in MRC format] | Domanska A, Plavec Z, Ruokolainen V, Löflund B, Marjomäki V, Butcher SJ [Pubmed: 36448797] [DOI: 10.1128/jvi.01367-22] |
2.3 TB | 3.5 Å | |
2019-09-30 | Human pre-B spliceosome and U4/U6.U5 tri-snRNP [multiple data sets in MRC and MRCS formats] | Charenton C, Wilkinson ME, Nagai K [Pubmed: 30975767] [DOI: 10.1126/science.aax3289] |
2.3 TB | 2.9 - 28.0 Å | |
2020-05-29 | Single-Particle Cryo-EM of Arabinofuranosyltransferase AftD from Mycobacteria, Mutant R1389S [multiple data sets in TIFF, MRC and MRCS formats] | Tan YZ, Zhang L, Rodrigues J, Zheng RB, Giacometti SI, Rosário AL, Kloss B, Dandey VP, Wei H, Brunton R, Raczkowski AM, Athayde D, Catalão MJ, Pimentel M, Clarke OB, Lowary TL, Archer M, Niederweis M, Potter CS, Carragher B, Mancia F [Pubmed: 32386575] [DOI: 10.1016/j.molcel.2020.04.014] |
2.3 TB | 3.4 - 3.5 Å | |
2024-05-14 | Cryo-EM structure of CAK in complex with nucleotide analogue ATPgS [5781 multi-frame micrographs composed of 981 frames each in EER format] | Cushing VI, Koh AF, Feng J, Ali S, Kotecha A, Greber BJ [Pubmed: 38480681] [DOI: 10.1038/s41467-024-46375-9] |
2.3 TB | 1.9 Å | |
2023-04-11 | Cryo-EM micrographs for the Bombyx mori R2 retrotransposon initiating target-primed reverse transcription [16551 multi-frame micrographs composed of 40 frames each in TIFF format] | Wilkinson ME, Zhang F [Pubmed: 37023171] [DOI: 10.1126/science.adg7883] |
2.3 TB | 3.08 Å | |
2024-03-26 | Cryo electron microscopy of assemblies based on truncated PVY coat protein [2862 multi-frame micrographs composed of 44 frames each in TIFF format] | Kavcic L, Kezar A [Pubmed: 38233506] [DOI: 10.1038/s42004-024-01100-x] |
2.3 TB | 2.93 - 3.62 Å | |
2021-06-04 | Distinct mechanisms of the human mitoribosome recycling and antibiotic resistance [stack of 6649 particles in MRC format] | Keshavan P, Banavali NK [Pubmed: 34127662] [DOI: 10.1038/s41467-021-23726-4] |
2.3 TB | 3.15 - 3.49 Å | |
2021-04-14 | Human NLRP1-DPP9 complex [multiple data sets in TIFF format] | Hollingsworth LR, Sharif H, Wu H [Pubmed: 33731932] [DOI: 10.1038/s41586-021-03350-4] |
2.3 TB | 3.6 Å | |
2022-06-22 | Cryo electron microscopy of inactive hyaluronan synthase with UDP-GlcNAc [9026 multi-frame micrographs composed of 40 frames each in TIFF format] | Maloney FP, Kuklewicz J, Zimmer J [Pubmed: 35355017] [DOI: 10.1038/s41586-022-04534-2] |
2.3 TB | 2.7 - 3.1 Å | |
2022-09-09 | E. coli 70S-RNAP expressome complex in collided state (with NusG, 34nt intervening mRNA) [7712 multi-frame micrographs in TIFF format] [7712 multi-frame micrographs composed of 41 frames each in TIFF format] | Webster MW, Takacs M, Zhu C, Vidmar V, Eduljee A, Abdelkareem M, Weixlbaumer A [Pubmed: 32820062] [DOI: 10.1126/science.abb5036] |
2.3 TB | 3.5 Å | |
2022-11-15 | Reconstituted USP1, UAF1, FANCI, mono-ubiquitinated FANCD2 and the inhibitor ML323 [10998 multi-frame micrographs composed of 40 frames each in TIFF format] | Rennie ML, Walden H [Pubmed: 36170365] [DOI: 10.1126/sciadv.abq6353] |
2.3 TB | 2.49 - 2.85 Å | |
2022-06-07 | Cryo-EM structure of Bacillus subtilis RNA Polymerase elongation complex [4486 multi-frame micrographs composed of 40 frames each in MRC format] | Newing T, Oakley A, Miller M, Dawson C, Brown S, Bouwer J, Tolun G, Lewis P [Pubmed: 33339820] [DOI: 10.1038/s41467-020-20157-5] |
2.3 TB | 3.36 Å | |
2020-07-21 | TASK2 in MSP1D1 lipid nanodisc at pH8.5 [3470 multi-frame micrographs composed of 50 frames each in TIFF format] | Li B, Brohawn SG [Pubmed: 32999458] [DOI: 10.1038/s41586-020-2770-2] |
2.3 TB | 3.52 Å |