오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
Release date | Imageset | Title | Authors and references | Size | Resolution |
---|---|---|---|---|---|
2022-11-14 | Memantine-bound GluN1a-GluN2B NMDA receptors [3657 multi-frame micrographs composed of 30 frames each in TIFF format] | Chou THC, Furukawa FH [Pubmed: 35637422] [DOI: 10.1038/s41594-022-00772-0] |
721.7 GB | 3.96 Å | |
2022-11-29 | 1.42 Angstrom Apoferritin structure determined using G1 Titan krios S-FEG operated at 300kV, zero loss imaging using Gatan BioQuantum energy filter operated at 10eV slit width and imaged using K2 camera. [multiple data sets in MRC format] | Venugopal H | 668.6 GB | 1.42 Å | |
2023-04-12 | LRRC8A-BRIL:C Heteromer in GDN [multiple data sets in TIFF and MRCS formats] | Kern DM, Brohawn SG [Pubmed: 36928458] [DOI: 10.1038/s41594-023-00944-6] |
8.9 TB | 2.95 - 4.16 Å | |
2023-02-15 | Structural basis of a transcription pre-initiation complex on a divergent promoter [51 tilt series in TIFF format] | Gorbea Colón JJ, Palao L, Chen SF, Kim HJ, Snyder L, Chang YW, Tsai KL, Murakami K [Pubmed: 36731470] [DOI: 10.1016/j.molcel.2023.01.011] |
151.3 GB | 26.0 Å | |
2024-03-18 | Mycobacterium phage Che8 mutant capsid (gene 110 deletion) [8118 multi-frame micrographs composed of 30 frames each in TIFF format] | Podgorski JM, White SJ | 2.2 TB | 2.39 Å | |
2022-11-28 | Cryo-EM Structure of Formate Dehydrogenase 1 from Methylorubrum extorquens AM1 [7650 multi-frame micrographs composed of 40 frames each in TIFF format] | Yoshikawa T, Makino F, Miyata T, Suzuki Y, Tanaka H, Namba K, Kano K, Sowa K, Kitazumi Y, Shirai O [Pubmed: 35535582] [DOI: 10.1039/d2cc01541b] |
1.4 TB | 2.19 Å | |
2023-08-18 | Initiation complex consisting of E. coli 70S ribosome with AAA mRNA codon in the A-site incubated with a ternary complex containing cognate acylated tRNA(Lys) [8435 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Glatt S [Pubmed: 37553384] [DOI: 10.1038/s41467-023-40422-7] |
3.2 TB | 2.33 - 2.88 Å | |
2023-08-18 | Initiation complex consisting of E. coli 70S ribosome with AAm6A mRNA codon in the A-site incubated with a ternary complex containing cognate acylated tRNA(Lys) [7207 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Glatt S [Pubmed: 37553384] [DOI: 10.1038/s41467-023-40422-7] |
2.7 TB | 2.11 - 2.62 Å | |
2023-08-18 | Initiation complex consisting of E. coli 70S ribosome with Am6AA mRNA codon in the A-site incubated with a ternary complex containing cognate acylated tRNA(Lys) [7172 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Glatt S [Pubmed: 37553384] [DOI: 10.1038/s41467-023-40422-7] |
2.7 TB | 2.21 - 2.81 Å | |
2023-08-18 | Initiation complex consisting of E. coli 70S ribosome with m6AAA mRNA codon in the A-site incubated with a ternary complex containing cognate acylated tRNA(Lys) [9366 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Glatt S [Pubmed: 37553384] [DOI: 10.1038/s41467-023-40422-7] |
3.3 TB | 2.37 - 2.85 Å | |
2023-08-18 | Initiation complex consisting of E. coli 70S ribosome with AAA mRNA codon in the A-site [10115 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Glatt S [Pubmed: 37553384] [DOI: 10.1038/s41467-023-40422-7] |
3.8 TB | 2.04 Å | |
2023-08-18 | Initiation complex consisting of E. coli 70S ribosome with AAm6A mRNA codon in the A-site [10276 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Glatt S [Pubmed: 37553384] [DOI: 10.1038/s41467-023-40422-7] |
4.0 TB | 2.04 Å | |
2023-02-15 | Structural basis of a transcription pre-initiation complex on a divergent promoter [55 tilt series in TIFF format] | Gorbea Colón JJ, Palao L, Chen SF, Kim HJ, Snyder L, Chang YW, Tsai KL, Murakami K [Pubmed: 36731470] [DOI: 10.1016/j.molcel.2023.01.011] |
105.8 GB | 36.0 Å | |
2023-08-18 | Cryo-EM study on a single, highly heterogeneous cellular fraction with megadalton complexes derived from Chaetomium thermophilum [522 multi-frame micrographs composed of 30 frames each in MRC format] | Semchonok DA, Kyrilis FL, Hamdi F, Kastritis PL [DOI: 10.2139/ssrn.4211492] |
489.4 GB | 3.46 - 3.74 Å | |
2022-11-15 | Cryo-EM movies of the human α1β3γ2 GABAA receptor in a lipid bilayer bound to diazepam and GABA [1472 multi-frame micrographs composed of 40 frames each in TIFF format] | Masiulis S, Desai R, Uchanski T, Serna Martin I, Laverty D, Karia D, Malinauskas T, Zivanov J, Pardon E, Kotecha A, Steyaert J, Miller KW, Aricescu AR [Pubmed: 30602790] [DOI: 10.1038/s41586-018-0832-5] |
1.8 TB | 3.58 Å | |
2022-11-14 | Cryo-EM movies of the human α1β3γ2 GABAA receptor in a lipid bilayer bound to alprazolam and GABA [815 multi-frame micrographs composed of 75 frames each in TIFF format] | Masiulis S, Desai R, Uchanski T, Serna Martin I, Laverty D, Karia D, Malinauskas T, Zivanov J, Pardon E, Kotecha A, Steyaert J, Miller KW, Aricescu AR [Pubmed: 30602790] [DOI: 10.1038/s41586-018-0832-5] |
1.0 TB | 3.26 Å | |
2022-11-15 | Cryo-EM movies of the human α1β3γ2 GABAA receptor in a lipid bilayer bound to bicuculline [988 multi-frame micrographs composed of 75 frames each in TIFF format] | Masiulis S, Desai R, Uchanski T, Serna Martin I, Laverty D, Karia D, Malinauskas T, Zivanov J, Pardon E, Kotecha A, Steyaert J, Miller KW, Aricescu AR [Pubmed: 30602790] [DOI: 10.1038/s41586-018-0832-5] |
1.2 TB | 3.69 Å | |
2022-11-14 | Cryo-EM movies of the human α1β3γ2 GABAA receptor in a lipid bilayer bound to picrotoxin and GABA [794 multi-frame micrographs composed of 75 frames each in TIFF format] | Masiulis S, Desai R, Uchanski T, Serna Martin I, Laverty D, Karia D, Malinauskas T, Zivanov J, Pardon E, Kotecha A, Steyaert J, Miller KW, Aricescu AR [Pubmed: 30602790] [DOI: 10.1038/s41586-018-0832-5] |
1017.1 GB | 3.04 Å | |
2022-11-15 | Reconstituted USP1, UAF1, FANCI, mono-ubiquitinated FANCD2 and the inhibitor ML323 [10998 multi-frame micrographs composed of 40 frames each in TIFF format] | Rennie ML, Walden H [Pubmed: 36170365] [DOI: 10.1126/sciadv.abq6353] |
2.3 TB | 2.49 - 2.85 Å | |
2022-11-21 | Tau Paired Helical Filament from Alzheimer's Disease incubated with EGCG for 3 hours [6406 multi-frame micrographs composed of 30 frames each in MRCS format] | Seidler PM, Murray KA, Boyer DR, Ge P, Sawaya MR, Eisenberg DS [Pubmed: 36114178] [DOI: 10.1038/s41467-022-32951-4] |
1.7 TB | 3.8 Å | |
2022-11-21 | Tau Paired Helical Filament from Alzheimer's Disease incubated 1 hr. with EGCG [3890 multi-frame micrographs composed of 48 frames each in TIFF format] | Seidler PM, Murray KA, Boyer DR, Ge P, Sawaya MR, Eisenberg DS [Pubmed: 36114178] [DOI: 10.1038/s41467-022-32951-4] |
3.7 TB | 3.3 Å | |
2022-11-21 | Tau Paired Helical Filament from Alzheimer's Disease not incubated with EGCG [2651 multi-frame micrographs composed of 48 frames each in TIFF format] | Seidler PM, Murray KA, Boyer DR, Ge P, Sawaya MR, Eisenberg DS [Pubmed: 36114178] [DOI: 10.1038/s41467-022-32951-4] |
2.5 TB | 3.4 Å | |
2023-02-28 | GroEL on Quantifoil grid [783 multi-frame micrographs composed of 40 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
128.4 GB | 2.81 Å | |
2022-12-05 | Reconstituted USP1, UAF1, FANCI, and mono-ubiquitinated FANCD2 [4593 multi-frame micrographs composed of 59 frames each in TIFF format] | Rennie ML, Walden H [Pubmed: 33795880] [DOI: 10.1038/s41594-021-00576-8] |
1.6 TB | 3.7 Å | |
2023-02-03 | Cryo-electron tomography on plasma FIB lamellae of HeLa cells [6481 tilt series in EER format] | Berger C, Dumoux M, Glen T, Yee NB, Mitchels JM, Patáková Z, Darrow MC, Naismith JH, Grange M [Pubmed: 36746945] [DOI: 10.1038/s41467-023-36372-9] |
622.2 GB | 4.9 Å |