오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
Release date | Imageset | Title | Authors and references | Size | Resolution |
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2023-10-13 | SBF-SEM micrographs of A. algerae microsporidia spores, 45 min germination [300 micrographs in TIFF format] | Davydov A, Jaroenlak P, Ekiert D, Bhabha G [DOI: 10.7554/eLife.86638.1] |
55.9 GB | — | |
2023-10-13 | SBF-SEM micrographs of A. algerae microsporidia spores, 5 min germination [1215 micrographs in TIFF format] | Davydov A, Jaroenlak P, Ekiert D, Bhabha G [DOI: 10.7554/eLife.86638.1] |
226.3 GB | — | |
2023-10-10 | SBF-SEM micrographs of A. algerae spores, Ungerminated [250 micrographs in TIFF format] | Jaroenlak P, Cammer M, Davydov A, Sall J, Usmani M, Liang F, Ekiert D, Bhabha G [Pubmed: 32946515] [DOI: 10.1371/journal.ppat.1008738] |
46.6 GB | — | |
2016-01-20 | SBF-SEM of early schizont-stage malaria parasite infected red blood cell [80 micrographs in MRC format] | Sakaguchi M, Miyazaki N, Fujioka H, Kaneko O, Murata K [Pubmed: 26772147] [DOI: 10.1016/j.jsb.2016.01.003] |
222.1 MB | — | |
2016-01-20 | SBF-SEM of late schizont-stage malaria parasite infected red blood cell [90 micrographs in MRC format] | Sakaguchi M, Miyazaki N, Fujioka H, Kaneko O, Murata K [Pubmed: 26772147] [DOI: 10.1016/j.jsb.2016.01.003] |
219.7 MB | — | |
2016-01-20 | SBF-SEM of ring-stage malaria parasite infected red blood cell [120 micrographs in MRC format] | Sakaguchi M, Miyazaki N, Fujioka H, Kaneko O, Murata K [Pubmed: 26772147] [DOI: 10.1016/j.jsb.2016.01.003] |
293.0 MB | — | |
2016-01-20 | SBF-SEM of trophozoite-stage malaria parasite infected red blood cell [110 micrographs in MRC format] | Sakaguchi M, Miyazaki N, Fujioka H, Kaneko O, Murata K [Pubmed: 26772147] [DOI: 10.1016/j.jsb.2016.01.003] |
268.6 MB | — | |
2023-03-17 | SBFSEM imaging of Leishmania haptomonad-like cells attached to plastic [252 multi-frame micrographs composed of 1 frames each in MRC format] | Yanase R, Sunter JD [DOI: 10.1101/2022.10.28.514187] |
33.6 GB | — | |
2023-03-16 | SBFSEM imaging of Leishmania haptomonads on the stomodeal valve in the sand fly [400 multi-frame micrographs composed of 1 frames each in MRC format] | Yanase R, Sunter JD [DOI: 10.1101/2022.10.28.514187] |
82.0 GB | — | |
2024-03-18 | SJ25C1 Fab in complex with soluble CD19 [multiple data sets in TIFF format] | Meyerson JR, He C [Pubmed: 36867678] [DOI: 10.1126/sciimmunol.adf1426] |
3.8 TB | 3.4 Å | |
2021-04-14 | SN-407-LRRC8A in MSP1E3D1 lipid nanodiscs [3576 multi-frame micrographs composed of 50 frames each in TIFF format] | Kern DM, Gerber EE, Brohawn SG [Pubmed: 35145074] [DOI: 10.1038/s41467-022-28435-0] |
2.7 TB | 3.65 Å | |
2024-01-23 | SPA cryo-EM micrographs of chicken FANCD2-FANCI3D alone [1845 multi-frame micrographs composed of 80 frames each in MRC format] | Sijacki T, Alcon P, Chen ZA, McLaughlin SH, Shakeel S, Rappsilber J, Passmore LA [Pubmed: 36050501] [DOI: 10.1038/s41594-022-00820-9] |
2.0 TB | 4.1 Å | |
2024-01-23 | SPA cryo-EM micrographs of chicken FANCD2-FANCI3D with ds 44-bpDNA [14842 multi-frame micrographs composed of 40 frames each in TIFF format] | Sijacki T, Alcon P, Chen ZA, McLaughlin SH, Shakeel S, Rappsilber J, Passmore LA [Pubmed: 36050501] [DOI: 10.1038/s41594-022-00820-9] |
2.5 TB | 3.53 Å | |
2024-01-23 | SPA cryo-EM micrographs of chicken ubiquitinated FANCD2-FANCI3D with ds 44-bpDNA [6515 multi-frame micrographs composed of 40 frames each in MRC format] | Sijacki T, Alcon P, Chen ZA, McLaughlin SH, Shakeel S, Rappsilber J, Passmore LA [Pubmed: 36050501] [DOI: 10.1038/s41594-022-00820-9] |
866.4 GB | 4.4 Å | |
2020-07-27 | Saccharomyces cerevisiae fatty acid synthase complex [multiple data sets in MRC and MRCS formats] | Singh K, Graf B, Stark H, Chari A [Pubmed: 32160528] [DOI: 10.1016/j.cell.2020.02.034] |
391.7 GB | 2.9 Å | |
2020-07-27 | Saccharomyces cerevisiae fatty acid synthase complex with bound gamma subunit [multiple data sets in MRC and MRCS formats] | Singh K, Graf B, Stark H, Chari A [Pubmed: 32160528] [DOI: 10.1016/j.cell.2020.02.034] |
329.3 GB | 2.8 Å | |
2023-04-11 | Sarecycline inhibits protein translation in Cutibacterium acnes 70S ribosome using a two-site mechanism [multiple data sets in TIFF and MRC formats] | Lomakin IB, Devarkar SC, Patel S, Grada A, Bunick CG [Pubmed: 36864821] [DOI: 10.1093/nar/gkad103] |
6.2 TB | 2.78 Å | |
2019-06-07 | Scanning electron diffraction data collected from peptide microcrystals [30000 micrographs in DM4 format] | Gallagher-Jones M, Rodriguez JA, Bustillo K, Ophus C [Pubmed: 30675524] [DOI: 10.1038/s42003-018-0263-8] |
144.3 GB | — | |
2024-03-18 | Seeded Aβ(1-40) amyloid fibril [3018 multi-frame micrographs composed of 40 frames each in TIFF format] | Pfeiffer PB, Schmidt M, Fändrich M [Pubmed: 38158175] [DOI: 10.1016/j.jmb.2023.168422] |
550.2 GB | 2.97 Å | |
2018-01-03 | Segment /nodes network analysis of the tubular system of the Neonate and Adult GP cardiomyocyte [167 multi-frame micrographs composed of 1 frames each in TIFF format] | Kashbour H, Taggart M, White K | 787.5 MB | — | |
2018-01-03 | Segment /nodes network analysis of the tubular system of the prenatal stages of GP cardiomyocyte [254 multi-frame micrographs composed of 1 frames each in TIFF format] | Kashbour H, Taggart M | 1.9 GB | — | |
2020-07-14 | Separating distinct macromolecular assemblies from cryo-EM images [2423 micrographs in MRC format] | Verbeke EJ, Zhou Y, Horton AP, Mallam AL, Taylor DW, Marcotte EM [Pubmed: 31726096] [DOI: 10.1016/j.jsb.2019.107416] |
128.5 GB | 4.0 - 19.0 Å | |
2019-05-21 | Serial Block Face SEM of HeLa cell pellet with 10 nm pixels and 50 nm slices (benchmark dataset) [518 micrographs in DM4 format] | Peddie CP, Jones ML, Collinson LM | 129.8 GB | — | |
2019-05-21 | Serial Block Face SEM of HeLa cell pellet with 5 nm pixels and 50 nm slices (benchmark dataset) [518 micrographs in DM4 format] | Peddie CP, Jones ML, Collinson LM | 129.8 GB | — | |
2018-01-17 | Serial Block Face Scanning Electron Micrscopy dataset of fetal day 64 guinea pig psoas muscle in transverse [93 micrographs in TIFF format] | Cocks ET [DOI: 10.1111/jmi.12676] |
264.4 MB | — |