오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
Release date | Imageset | Title | Authors and references | Size | Resolution |
---|---|---|---|---|---|
2023-01-31 | PYD-106 bound human GluN1a-GluN2C NMDA receptor in the presence of D-cycloserine and glutamate [11714 multi-frame micrographs composed of 30 frames each in TIFF format] | Chou TH [Pubmed: 36309015] [DOI: 10.1016/j.molcel.2022.10.008] |
2.1 TB | 3.72 - 4.19 Å | |
2023-07-25 | AP2 bound to MSP2N2 lipid nanodisc [7698 multi-frame micrographs composed of 60 frames each in TIFF format] | Baker RW, Cannon KS, Sarsam RD [Pubmed: 37364761] [DOI: 10.1016/j.jsb.2023.107989] |
2.1 TB | 3.9 Å | |
2022-01-21 | Cryo-EM structure of a cis-dimer TTYH3 [3217 multi-frame micrographs composed of 50 frames each in TIFF format] | Li B, Hoel CM, Brohawn SG [Pubmed: 34824283] [DOI: 10.1038/s41467-021-27283-8] |
2.1 TB | 3.23 Å | |
2023-01-30 | Cryogenic electron tomographs of Coxsackievirus A9 [2421 multi-frame micrographs composed of 30 frames each in MRC format] | Domanska A, Plavec Z, Ruokolainen V, Löflund B, Marjomäki V, Butcher SJ [Pubmed: 36448797] [DOI: 10.1128/jvi.01367-22] |
2.1 TB | 2.9 Å | |
2020-09-30 | Structure of the Bacterial Ribosome at 2 Å Resolution [multiple data sets in TIFF format] | Watson ZL, Ward FR, Méheust R, Ad O, Schepartz A, Banfield JF, Cate JH [Pubmed: 32924932] [DOI: 10.7554/eLife.60482] |
2.1 TB | 1.98 Å | |
2023-11-14 | Ligand-free SpSLC9C1 in detergent [multiple data sets in TIFF format] | Kalienkova V, Peter MF, Rheinberger J, Paulino C [Pubmed: 37880361] [DOI: 10.1038/s41586-023-06629-w] |
2.1 TB | 3.05 - 3.3 Å | |
2021-05-25 | Human DPP9-CARD8 complex-VbP [multiple data sets in TIFF format] | Sharif H, Hollingsworth LR, Griswold AR, Hsiao JC, Wang Q, Bachovchin DA, Wu H [Pubmed: 34019797] [DOI: 10.1016/j.immuni.2021.04.024] |
2.1 TB | 3.3 Å | |
2020-01-31 | CryoEM dataset containing multiple conformations of the asymmetric αVβ8 integrin bound to latent TGF-β on a graphene oxide grid (preferred orientations) [multiple data sets in TIFF, MRC and MRCS formats] | Campbell MG, Cheng Y [Pubmed: 31955848] [DOI: 10.1016/j.cell.2019.12.030] |
2.2 TB | 2.87 - 3.6 Å | |
2024-04-02 | Cryo-EM of SARS-CoV-1 5' proximal stem-loop 5 [multiple data sets in TIFF and MRC formats] | Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R [Pubmed: 38427602] [DOI: 10.1073/pnas.2320493121] |
2.2 TB | 7.1 Å | |
2022-06-20 | Cryo-EM data used for the determination of the structures of LACV-L in 3 different states: replication initiation state, transcription capped primer active site entry state and transcription initiation state [14341 multi-frame micrographs composed of 40 frames each in TIFF format] | Arragain B, Durieux Trouilleton Q, Baudin F, Provaznik J, Azevedo N, Cusack S, Schoehn G, Malet H [Pubmed: 35173159] [DOI: 10.1038/s41467-022-28428-z] |
2.2 TB | 2.8 - 3.6 Å | |
2022-03-21 | CryoEM of PreP prepared via Chameleon [multiple data sets in TIFF and MRC formats] | Liang WG, Wijaya J, Wei H, Noble AJ, Mancl JM, Mo S, Lee D, Lin King JV, Pan M, Liu C, Koehler CM, Zhao M, Potter CS, Carragher B, Li S, Tang WJ [Pubmed: 35383169] [DOI: 10.1038/s41467-022-29322-4] |
2.2 TB | 3.3 - 4.6 Å | |
2023-08-18 | Mouse heavy chain apoferritin in vitreous ice after laser-melting and revitrification [12047 multi-frame micrographs composed of 553 frames each in EER format] | Bongiovanni G, Harder OF, Drabbels M, Lorenz UJ [Pubmed: 36438663] [DOI: 10.3389/fmolb.2022.1044509] |
2.2 TB | 1.63 Å | |
2021-02-10 | Cryo EM strutcture of the full-length WzmWzt ABC transporter required for lipid-linked O antigen transport [5938 multi-frame micrographs composed of 31 frames each in TIFF format] | Zimmer J, Caffalette CA [Pubmed: 33443152] [DOI: 10.1073/pnas.2016144118] |
2.2 TB | 3.6 Å | |
2022-03-15 | Cryo-EM structure of human RNA polymerase I Open Complex and in complex with RRN3 [14224 multi-frame micrographs composed of 40 frames each in TIFF format] | Misiaszek AD, Girbig M, Müller CW [Pubmed: 34887565] [DOI: 10.1038/s41594-021-00693-4] |
2.2 TB | 3.1 - 3.3 Å | |
2023-09-22 | Carboxysome minishell containing CsoS1A4A and truncated CsoS2 [13151 multi-frame micrographs composed of 40 frames each in TIFF format] | Ni T, Jiang Q, Ng PC, Dou H, Liu LN, Zhang P [Pubmed: 37679318] [DOI: 10.1038/s41467-023-41211-y] |
2.2 TB | 2.02 - 3.29 Å | |
2024-03-18 | Mycobacterium phage Che8 mutant capsid (gene 110 deletion) [8118 multi-frame micrographs composed of 30 frames each in TIFF format] | Podgorski JM, White SJ | 2.2 TB | 2.39 Å | |
2022-03-14 | Cryo-EM of the human insulin receptor ectodomain in complex with an insulin analog with truncated B chain and enlongated A chain [multiple data sets in MRC format] | Xiong X, Blakely A, Kim JH, Menting JG, Schäfer IB, Schubert HL, Agrawal R, Gutmann T, Delaine C, Zhang YW, Artik GO, Merriman A, Eckert D, Lawrence MC, Coskun Ü, Fisher SJ, Forbes BE, Safavi-Hemami H, Hill CP, Chou DH [Pubmed: 35289328] [DOI: 10.1038/s41589-022-00981-0] |
2.2 TB | 3.4 - 4.4 Å | |
2019-08-07 | Identification of a druggable VP1-VP3 interprotomer pocket in the capsid of enteroviruses [2120 micrographs in MRC format] | Geraets JA, Flatt JW, Domanska A, Butcher SJ [Pubmed: 31185007] [DOI: 10.1371/journal.pbio.3000281] |
2.2 TB | 4.0 Å | |
2021-06-11 | Cas6-reverse transcriptase-Cas1—Cas2 CRISPR integrase complex [3330 multi-frame micrographs composed of 50 frames each in TIFF format] | Hoel CM, Wang JY, Doudna JA, Brohawn SG [Pubmed: 33958590] [DOI: 10.1038/s41467-021-22900-y] |
2.2 TB | 3.4 - 3.9 Å | |
2023-09-08 | Cryo-EM micrographs of HIV-1 Vif bound to human APOBEC3H, CBF-beta, ELOB, ELOC, and N-terminal domain of CUL5 [14766 multi-frame micrographs composed of 49 frames each in TIFF format] | Ito F, Alvarez-Cabrera AL, Kim K, Zhou ZH, Chen XS [Pubmed: 37640699] [DOI: 10.1038/s41467-023-40955-x] |
2.2 TB | 3.24 - 3.54 Å | |
2019-12-20 | Single Particle Cryo-EM Reconstructions of Human FACT in Complex with Partially Assembled Sub-nucleosomes [multiple data sets in TIFF, MRC and MRCS formats] | Liu YL, Zhou KZ, Zhang NZ, Wei HW, Tan YZT, Zhang ZZ, Carragher BC, Potter CSP, D'Arcy SD, Luger KL [Pubmed: 31775157] [DOI: 10.1038/s41586-019-1820-0] |
2.2 TB | 4.9 - 7.4 Å | |
2023-05-17 | Structural basis of GTPase-mediated mitochondrial ribosome biogenesis and recycling - dataset2 [10537 multi-frame micrographs composed of 40 frames each in TIFF format] | Hillen HS [Pubmed: 34135319] [DOI: 10.1038/s41467-021-23702-y] |
2.2 TB | 2.7 - 2.9 Å | |
2022-09-23 | CryoEM structure of the A.aeolicus WzmWzt transporter in the presence of the native O antigen and ATP [8625 multi-frame micrographs composed of 40 frames each in TIFF format] | Spellmon N [Pubmed: 36064941] [DOI: 10.1038/s41467-022-32597-2] |
2.2 TB | 3.3 - 3.5 Å | |
2022-07-18 | Thylakoid-located voltage-dependent chloride channel VCCN1 [multiple data sets in TIFF format] | Hagino T, Kato T, Kasuya G, Kobayashi K, Kusakizako T, Hamamoto S, Sobajima T, Fujiwara Y, Yamashita K, Kawasaki H, Maturana AD, Nishizawa T, Nureki O [Pubmed: 35523970] [DOI: 10.1038/s41467-022-30292-w] |
2.2 TB | 2.7 - 3.0 Å | |
2021-11-15 | CryoEM structure of GABA(A)R-beta3 homopentamer at 3.4A from Tundra, 100kV microscope [4073 multi-frame micrographs composed of 18 frames each in MRC format] | Karia D, Koh AF, Yu L, Kotecha A | 2.2 TB | 3.4 Å |