오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
Release date | Imageset | Title | Authors and references | Size | Resolution |
---|---|---|---|---|---|
2021-08-27 | CryoEM map of designed helical fusion protein C4_nat_HF-7900 [3607 multi-frame micrographs composed of 56 frames each in TIFF format] | Redler RL, Edman NI, Baker D, Ekiert D, Bhabha G [Pubmed: 33863889] [DOI: 10.1038/s41467-021-22276-z] |
2.0 TB | 3.7 Å | |
2021-07-30 | Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity [8120 multi-frame micrographs composed of 80 frames each in TIFF format] | Gupta TK, Klumpe S, Gries K, Strauss M, Rudack T, Schuller JM, Schroda M, Engel BD [Pubmed: 34166613] [DOI: 10.1016/j.cell.2021.05.011] |
2.0 TB | 3.8 Å | |
2023-01-19 | Cryo-EM structure of the RhlR-PqsE complex from Pseudomonas aeruginosa [multiple data sets in TIFF and MRCS formats] | Feathers JR, Fromme JC, Paczkowski JE [Pubmed: 36379213] [DOI: 10.1016/j.str.2022.10.008] |
2.0 TB | 3.74 - 4.1 Å | |
2022-01-28 | CryoEM of Mycobacterium tuberculosis WT RNAP holoenzyme/RbpA bound to the Fdx and upstream fork DNA [multiple data sets in MRC format] | Boyaci H, Chen J, Lilic M, Palka M, Mooney RA, Landick R, Darst SA, Campbell EA [Pubmed: 29480804] [DOI: 10.7554/eLife.34823] |
2.0 TB | 3.38 Å | |
2024-02-06 | Single-particle cryo-EM unaligned micrographs of NTD-directed neutralizing antibody 4-18 in complex with prefusion SARS-CoV-2 spike glycoprotein [7711 multi-frame micrographs composed of 50 frames each in TIFF format] | Cerutti G, Guo Y, Zhou T, Gorman J, Lee M, Rapp M, Reddem ER, Yu J, Bahna F, Bimela J, Huang Y, Katsamba PS, Liu L, Nair MS, Rawi R, Olia AS, Wang P, Zhang B, Chuang GY, Ho DD, Sheng Z, Kwong PD, Shapiro L [Pubmed: 33789084] [DOI: 10.1016/j.chom.2021.03.005] |
2.0 TB | 2.97 Å | |
2024-01-23 | SPA cryo-EM micrographs of chicken FANCD2-FANCI3D alone [1845 multi-frame micrographs composed of 80 frames each in MRC format] | Sijacki T, Alcon P, Chen ZA, McLaughlin SH, Shakeel S, Rappsilber J, Passmore LA [Pubmed: 36050501] [DOI: 10.1038/s41594-022-00820-9] |
2.0 TB | 4.1 Å | |
2016-11-10 | Structural basis for dynamic regulation of the human 26S proteasome [multiple data sets in SPIDER and MRC formats] | Chen S, Wu J, Lu Y, Ma YB, Lee BH, Yu Z, Ouyang Q, Finley D, Kirschner MW, Mao Y [Pubmed: 27791164] [DOI: 10.1073/pnas.1614614113] |
2.0 TB | 3.8 - 8.0 Å | |
2021-09-01 | CryoEM map of designed helical fusion protein C5_HFuse-3921 [6761 multi-frame micrographs composed of 50 frames each in TIFF format] | Redler RL, Edman NI, Baker D, Ekiert D, Bhabha G [Pubmed: 33863889] [DOI: 10.1038/s41467-021-22276-z] |
2.0 TB | 8.06 Å | |
2022-07-26 | Human Kv1.3 with a Fab-ShK fusion [5079 multi-frame micrographs composed of 48 frames each in TIFF format] | Meyerson JR, Selvakumar P [Pubmed: 35788586] [DOI: 10.1038/s41467-022-31285-5] |
2.0 TB | 3.39 Å | |
2022-01-21 | Structure of pathological TDP-43 filaments from ALS with FTLD (Individual 1, motor cortex) [12245 multi-frame micrographs composed of 40 frames each in TIFF format] | Arseni D, Hasegawa M, Murzin AG, Kametani F, Arai M, Yoshida M, Ryskeldi-Falcon B [Pubmed: 34880495] [DOI: 10.1038/s41586-021-04199-3] |
2.0 TB | 2.94 Å | |
2024-04-16 | Mycobacterium phage Adjutor [6667 multi-frame micrographs composed of 30 frames each in TIFF format] | Podgorski JM | 2.0 TB | 2.66 Å | |
2022-01-24 | Structural Insights of Transcriptionally Active, Full-Length Androgen Receptor Coactivator Complexes [multiple data sets in MRC and TIFF formats] | Yu X, Yi P [Pubmed: 32668201] [DOI: 10.1016/j.molcel.2020.06.031] |
2.0 TB | 20.0 Å | |
2021-11-16 | cryoEM of Mycobacterium tuberculosis WT RNAP holo enzyme with WhiB7 transcription factor bound to the Mtb WhiB7 promoter [8494 multi-frame micrographs composed of 50 frames each in TIFF format] | Lilic M, Darst SA, Campbell EA [Pubmed: 34171296] [DOI: 10.1016/j.molcel.2021.05.017] |
2.0 TB | 2.94 Å | |
2020-08-18 | Cryo-EM structure of Human NatB with an Alpha-Synuclein peptide and CoA conjugate [5281 multi-frame micrographs composed of 35 frames each in TIFF format] | Deng S, Pan B, Gottlieb L, Petersson EJ, Marmorstein R [Pubmed: 32885784] [DOI: 10.7554/eLife.57491] |
2.0 TB | 3.46 Å | |
2020-07-21 | TASK2 in MSP1D1 lipid nanodisc at pH6.5 [3024 multi-frame micrographs composed of 50 frames each in TIFF format] | Li B, Brohawn SG [Pubmed: 32999458] [DOI: 10.1038/s41586-020-2770-2] |
2.0 TB | 3.45 Å | |
2023-06-30 | E. coli 50S ribosome bound to tiamulin and VS1 [multiple data sets in MRC and TIFF formats] | Pellegrino J, Seiple IB, Fraser JS, Lee DJ | 2.0 TB | 2.13 Å | |
2022-12-06 | Micrographs of ex vivo AA amyloid from renal tissue of a short hair cat deceased in a shelter [multiple data sets in TIFF format] | Schulte T, Chaves-Sanjuan A, Ricagno S [Pubmed: 36396658] [DOI: 10.1038/s41467-022-34743-2] |
2.0 TB | 3.3 Å | |
2022-07-08 | Minimal protein-only RNase P structure reveals insights into tRNA precursor recognition and catalysis [2370 multi-frame micrographs composed of 48 frames each in TIFF format] | Teramoto T, Koyasu T, Adachi N, Kawasaki M, Moriya T, Numata T, Senda T, Kakuta Y [Pubmed: 34339732] [DOI: 10.1016/j.jbc.2021.101028] |
2.0 TB | 3.62 Å | |
2024-02-09 | 5-HT2B receptor bound to LSD in complex with heterotrimeric mini-Gq protein obtained by cryo-electron microscopy (cryoEM) [3916 multi-frame micrographs composed of 57 frames each in TIFF format] | Barros-Alvarez X [Pubmed: 36087581] [DOI: 10.1016/j.neuron.2022.08.006] |
2.0 TB | 2.9 Å | |
2020-10-12 | Cryo electron microscopy of SARS-CoV-2 spike in prefusion state [3207 multi-frame micrographs composed of 30 frames each in MRC format] | Carazo JM [Pubmed: 33063791] [DOI: 10.1107/S2052252520012725] |
2.1 TB | 3.0 - 3.3 Å | |
2023-03-14 | LRRC8A-BRIL(T48D):C Heteromer in GDN [multiple data sets in TIFF and MRCS formats] | Kern DM, Brohawn SG [Pubmed: 36928458] [DOI: 10.1038/s41594-023-00944-6] |
2.1 TB | 3.1 - 4.32 Å | |
2020-08-19 | Cryo-EM structure of SARS-CoV-2 Spike Proteins on intact virions [7982 multi-frame micrographs composed of 48 frames each in TIFF format] | Ke Z, Qu K, Cortese M, Zila V, Nakane T, Xiong X, Scheres SHW, Briggs JAG [Pubmed: 32805734] [DOI: 10.1038/s41586-020-2665-2] |
2.1 TB | 3.5 - 4.1 Å | |
2023-12-11 | SpCas9 bound to 14 nucleotide complementary DNA substrate [multiple data sets in TIFF and DM4 formats] | Pacesa M, Loeff L, Querques I, Muckenfuss LM, Sawicka M, Jinek M [Pubmed: 36002571] [DOI: 10.1038/s41586-022-05114-0] |
2.1 TB | 3.49 Å | |
2021-05-17 | Single-Particle CryoEM of Human Apoferritin Light Chain Vitrified Using Back-it-up [multiple data sets in MRCS and MRC formats] | Tan YZ, Rubinstein JL [Pubmed: 33135680] [DOI: 10.1107/S2059798320012474] |
2.1 TB | 2.0 Å | |
2022-05-31 | Cryo-EM structure of human NKCC1 K289NA492E bound with bumetanide [4273 multi-frame micrographs composed of 40 frames each in TIFF format] | Zhao YZ [Pubmed: 35585053] [DOI: 10.1038/s41467-022-30407-3] |
2.1 TB | 3.6 Å |