오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
Release date | Imageset | Title | Authors and references | Size | Resolution |
---|---|---|---|---|---|
2017-11-30 | FIB-SEM of a dividing cell at 6.3 min after anaphase onset [3206 multi-frame micrographs composed of 1 frames each in TIFF format] | Otsuka S, Steyer AM, Schorb M, Hériché JK, Hossain MJ, Sethi S, Kueblbeck M, Schwab Y, Beck M, Ellenberg J [Pubmed: 29323269] [DOI: 10.1038/s41594-017-0001-9] |
83.2 GB | — | |
2017-11-28 | FIB-SEM of a dividing cell at 3.9 min after anaphase onset [2293 multi-frame micrographs composed of 1 frames each in TIFF format] | Otsuka S, Steyer AM, Schorb M, Hériché JK, Hossain MJ, Sethi S, Kueblbeck M, Schwab Y, Beck M, Ellenberg J [Pubmed: 29323269] [DOI: 10.1038/s41594-017-0001-9] |
26.8 GB | — | |
2017-11-30 | FIB-SEM of a dividing cell at 4.3 min after anaphase onset [1358 multi-frame micrographs composed of 1 frames each in TIFF format] | Otsuka S, Steyer AM, Schorb M, Hériché JK, Hossain MJ, Sethi S, Kueblbeck M, Schwab Y, Beck M, Ellenberg J [Pubmed: 29323269] [DOI: 10.1038/s41594-017-0001-9] |
14.0 GB | — | |
2017-11-30 | FIB-SEM of a dividing cell at 5.3 min after anaphase onset [1998 multi-frame micrographs composed of 1 frames each in TIFF format] | Otsuka S, Steyer AM, Schorb M, Hériché JK, Hossain MJ, Sethi S, Kueblbeck M, Schwab Y, Beck M, Ellenberg J [Pubmed: 29323269] [DOI: 10.1038/s41594-017-0001-9] |
31.2 GB | — | |
2017-11-28 | FIB-SEM of a dividing cell at 5.7 min after anaphase onset [2620 multi-frame micrographs composed of 1 frames each in TIFF format] | Otsuka S, Steyer AM, Schorb M, Hériché JK, Hossain MJ, Sethi S, Kueblbeck M, Schwab Y, Beck M, Ellenberg J [Pubmed: 29323269] [DOI: 10.1038/s41594-017-0001-9] |
63.0 GB | — | |
2024-01-23 | SpCas9 bound to 6 nucleotide complementary DNA substrate [multiple data sets in TIFF and DM4 formats] | Pacesa M, Loeff L, Querques I, Muckenfuss LM, Sawicka M, Jinek M [Pubmed: 36002571] [DOI: 10.1038/s41586-022-05114-0] |
1.5 TB | 3.87 Å | |
2023-12-11 | SpCas9 bound to 12 nucleotide complementary DNA substrate [multiple data sets in TIFF and DM4 formats] | Pacesa M, Loeff L, Querques I, Muckenfuss LM, Sawicka M, Jinek M [Pubmed: 36002571] [DOI: 10.1038/s41586-022-05114-0] |
1.1 TB | 3.64 Å | |
2023-12-11 | SpCas9 bound to 14 nucleotide complementary DNA substrate [multiple data sets in TIFF and DM4 formats] | Pacesa M, Loeff L, Querques I, Muckenfuss LM, Sawicka M, Jinek M [Pubmed: 36002571] [DOI: 10.1038/s41586-022-05114-0] |
2.1 TB | 3.49 Å | |
2023-12-11 | SpCas9 bound to 16 nucleotide complementary DNA substrate [multiple data sets in TIFF and DM4 formats] | Pacesa M, Loeff L, Querques I, Muckenfuss LM, Sawicka M, Jinek M [Pubmed: 36002571] [DOI: 10.1038/s41586-022-05114-0] |
1.3 TB | 3.12 Å | |
2023-12-11 | SpCas9 bound to 18 nucleotide complementary DNA substrate in the catalytic state [multiple data sets in TIFF and DM4 formats] | Pacesa M, Loeff L, Querques I, Muckenfuss LM, Sawicka M, Jinek M [Pubmed: 36002571] [DOI: 10.1038/s41586-022-05114-0] |
1.8 TB | 2.99 Å | |
2024-02-06 | SpCas9 bound to 18 nucleotide complementary DNA substrate in the checkpoint state [multiple data sets in EER format] | Pacesa M, Loeff L, Querques I, Muckenfuss LM, Sawicka M, Jinek M [Pubmed: 36002571] [DOI: 10.1038/s41586-022-05114-0] |
7.7 TB | 2.54 Å | |
2023-12-11 | SpCas9 bound to 10 nucleotide complementary DNA substrate [multiple data sets in TIFF and DM4 formats] | Pacesa M, Loeff L, Querques I, Muckenfuss LM, Sawicka M, Jinek M [Pubmed: 36002571] [DOI: 10.1038/s41586-022-05114-0] |
157.5 GB | 3.81 Å | |
2023-12-11 | SpCas9 bound to 8 nucleotide complementary DNA substrate [multiple data sets in TIFF and DM4 formats] | Pacesa M, Loeff L, Querques I, Muckenfuss LM, Sawicka M, Jinek M [Pubmed: 36002571] [DOI: 10.1038/s41586-022-05114-0] |
1.4 TB | 4.14 Å | |
2023-05-11 | Cryo electron tomography dataset of purified human TREX-mRNPs [multiple data sets in TIFF and MRC formats] | Pacheco-Fiallos B, Vorländer MK, Plaschka C [Pubmed: 37020021] [DOI: 10.1038/s41586-023-05904-0] |
1.1 TB | — | |
2024-03-26 | Single particle movie data of NAIP5/Flic complex [36143 multi-frame micrographs composed of 50 frames each in TIFF format] | Paidimuddala B, Cao J, Zhang L [Pubmed: 38055825] [DOI: 10.1126/sciadv.adi8539] |
3.1 TB | 2.93 Å | |
2022-01-18 | Single-particle cryoEM data of yeast Ubr1-Ubc2-Ub-N-degron complex (initiation) [10932 multi-frame micrographs composed of 40 frames each in TIFF format] | Pan M, Zhao M [Pubmed: 34789879] [DOI: 10.1038/s41586-021-04097-8] |
5.7 TB | 3.35 Å | |
2022-06-07 | Single-particle cryoEM data of yeast Ubr1-Ubc2-Ub-Ub-N-degron complex (elongation) [5413 multi-frame micrographs composed of 40 frames each in TIFF format] | Pan M, Zhao M [Pubmed: 34789879] [DOI: 10.1038/s41586-021-04097-8] |
2.9 TB | 3.67 Å | |
2022-01-25 | Single-particle cryoEM data of yeast Ubr1-Ub-N-degron complex (pre-elongation) [4101 multi-frame micrographs composed of 40 frames each in TIFF format] | Pan M, Zhao M [Pubmed: 34789879] [DOI: 10.1038/s41586-021-04097-8] |
1.9 TB | 6.04 Å | |
2022-01-18 | Single-particle cryoEM data of yeast Ubr1 (apo) [5912 multi-frame micrographs composed of 40 frames each in TIFF format] | Pan M, Zhao M [Pubmed: 34789879] [DOI: 10.1038/s41586-021-04097-8] |
3.2 TB | 7.69 Å | |
2022-09-09 | Tiltseries of Coxiella burnetii [35 tilt series in MRC format] | Park D, Steiner S, Shao M, Roy CR, Liu J [Pubmed: 36190257] [DOI: 10.1128/iai.00410-22] |
1.1 TB | 11.0 Å | |
2021-11-09 | Structure of human GABA(B) receptor in an inactive state [3435 multi-frame micrographs composed of 60 frames each in MRC format] | Park J, Fu Z, Frangaj A, Liu J, Mosyak L, Shen T, Slavkovich VN, Ray KM, Taura J, Cao B, Geng Y, Zuo H, Kou Y, Grassucci R, Chen S, Liu Z, Lin X, Williams JP, Rice WJ, Eng ET, Huang RK, Soni RK, Kloss B, Yu Z, Javitch JA, Hendrickson WA, Slesinger PA, Quick M, Graziano J, Yu H, Fiehn O, Clarke OB, Frank J, Fan QR [Pubmed: 32581365] [DOI: 10.1038/s41586-020-2452-0] |
854.1 GB | 3.3 Å | |
2022-05-17 | Structures of positive allosteric modulator-bound and unbound active human calcium-sensing receptor [13082 multi-frame micrographs composed of 60 frames each in TIFF format] | Park J, Zuo H, Frangaj A, Fu Z, Yen LY, Zhang Z, Mosyak L, Slavkovich VN, Liu J, Ray KM, Cao B, Vallese F, Geng Y, Chen S, Grassucci R, Dandey VP, Tan YZ, Eng E, Lee Y, Kloss B, Liu Z, Hendrickson WA, Potter CS, Carragher B, Graziano J, Conigrave AD, Frank J, Clarke OB, Fan QR [Pubmed: 34916296] [DOI: 10.1073/pnas.2115849118] |
3.8 TB | 2.7 Å | |
2022-03-08 | Structure of negative allosteric modulator-bound inactive human calcium-sensing receptor [15464 multi-frame micrographs composed of 50 frames each in TIFF format] | Park J, Zuo H, Frangaj A, Fu Z, Yen LY, Zhang Z, Mosyak L, Slavkovich VN, Liu J, Ray KM, Cao B, Vallese F, Geng Y, Chen S, Grassucci R, Dandey VP, Tan YZ, Eng E, Lee Y, Kloss B, Liu Z, Hendrickson WA, Potter CS, Carragher B, Graziano J, Conigrave AD, Frank J, Clarke OB, Fan QR [Pubmed: 34916296] [DOI: 10.1073/pnas.2115849118] |
4.0 TB | 5.9 Å | |
2022-09-09 | Human NTCP in complex with YN69083 Fab [multiple data sets in TIFF format] | Park JH, Iwamoto M, Yun JH, Uchikubo-Kamo T, Son D, Jin Z, Yoshida H, Ohki M, Ishimoto N, Mizutani K, Oshima M, Muramatsu M, Wakita T, Shirouzu M, Liu K, Uemura T, Nomura N, Iwata S, Watashi K, Tame JRH, Nishizawa T, Lee W, Park SY [Pubmed: 35580630] [DOI: 10.1038/s41586-022-04857-0] |
5.5 TB | 3.3 Å | |
2021-04-14 | Cryo electron tomography of the reconstituted TRIM72-proteoliposomes on both positive and negative curvatures. [multiple data sets in MRC format] | Park SH, Song HK | 6.2 GB | — |