오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
Release date | Imageset | Title | Authors and references | Size | Resolution |
---|---|---|---|---|---|
2022-07-18 | CryoEM single particle dataset for psNb 2-10, 2-67 and 2-62 with spike protein [3168 multi-frame micrographs composed of 40 frames each in TIFF format] | Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y [Pubmed: 35738279] [DOI: 10.1016/j.celrep.2022.111004] |
1.4 TB | 3.6 Å | |
2023-04-11 | Structure of human choline/ethanolamine phosphotransferase [3115 multi-frame micrographs composed of 32 frames each in TIFF format] | Qian H | 1.4 TB | 3.7 Å | |
2022-11-01 | CryoEM single particle dataset of delta-latroinsectotoxin dimer [2338 multi-frame micrographs composed of 60 frames each in TIFF format] | Gatsogiannis C, Chen M [Pubmed: 34845192] [DOI: 10.1038/s41467-021-26562-8] |
1.4 TB | 4.63 Å | |
2022-07-12 | C2-symmetric single-particle cryo-EM map of T. vaginalis FDPF3 - unaligned multi-frame micrographs [stack of 7398 particles in TIFF format] | Bell TA [Pubmed: 35780837] [DOI: 10.1016/j.jbc.2022.102210] |
1.4 TB | 6.6 - 6.8 Å | |
2024-05-01 | Structure of human calcium-sensing receptor in complex with Gi3 protein in nanodiscs [16504 multi-frame micrographs composed of 50 frames each in MRC format] | Zuo H, Park J, Frangaj A, Ye J, Lu G, Manning JJ, Asher WB, Lu Z, Hu G, Wang L, Mendez J, Eng E, Zhang Z, Lin X, Grasucci R, Hendrickson WA, Clarke OB, Javitch JA, Conigrave AD, Fan QR [Pubmed: 38632411] [DOI: 10.1038/s41586-024-07331-1] |
1.4 TB | 3.8 Å | |
2022-07-12 | CryoEM single particle dataset for psNb 2-57 with spike protein [3485 multi-frame micrographs composed of 40 frames each in TIFF format] | Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams Jr KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y [Pubmed: 35738279] [DOI: 10.1016/j.celrep.2022.111004] |
1.4 TB | 2.9 Å | |
2022-11-14 | Cryo-electron microscopy of Dicer-1 and Its Partner Protein Loqs-PB complex with model pre-miRNA in presence of Ca2+ ions [3057 multi-frame micrographs composed of 40 frames each in TIFF format] | Jouravleva K, Golovenko D, Demo G, Dutcher RC, Hall TMT, Zamore PD, Korostelev AA [Pubmed: 36182693] [DOI: 10.1016/j.molcel.2022.09.002] |
1.4 TB | 3.06 Å | |
2023-09-14 | Porcine uroplakin complex [multiple data sets in TIFF format] | Oda T, Yanagisawa H, Kikkawa M | 1.4 TB | 3.5 Å | |
2021-02-10 | Cryo-EM structure of K+-bound hERG channel [1496 multi-frame micrographs composed of 50 frames each in TIFF format] | Asai T, Adachi N, Moriya T, Kawasaki M, Suzuki K, Senda T, Murata T [Pubmed: 33450182] [DOI: 10.1016/j.str.2020.12.007] |
1.4 TB | 3.9 Å | |
2019-06-21 | Cryo electron micrographs of human cystic fibrosis transmembrane conductance regulator (CFTR) in complex with GLPG [3335 multi-frame micrographs composed of 50 frames each in TIFF format] | Zhang ZZ, Liu FL, Chen JC [Pubmed: 31221859] [DOI: 10.1126/science.aaw7611] |
1.4 TB | 3.2 Å | |
2023-07-25 | AP2 bound to MSP2N2 lipid nanodisc with tyrosine cargo peptide [4650 multi-frame micrographs composed of 60 frames each in TIFF format] | Baker RW, Cannon KS, Sarsam RD [Pubmed: 37364761] [DOI: 10.1016/j.jsb.2023.107989] |
1.4 TB | 3.3 - 3.4 Å | |
2023-07-14 | Structure of the Nucleosome Core Particle from Trypanosoma brucei [4913 multi-frame micrographs composed of 40 frames each in TIFF format] | Sandoval G, Deak G, Wapenaar H, Tuijtel MW, Wilson MD [Pubmed: 37427792] [DOI: 10.1093/nar/gkad577] |
1.4 TB | 3.3 Å | |
2019-04-05 | Rabbit muscle aldolase single particle cryoEM [multiple data sets in MRC format] | Bepler T, Morin A, Rapp M, Brasch J, Shapiro L, Noble AJ, Berger B [Pubmed: 31591578] [DOI: 10.1038/s41592-019-0575-8] |
1.4 TB | 3.7 - 3.92 Å | |
2022-07-18 | Structure of the Dicer-2-R2D2 heterodimer bound to a small RNA duplex [multiple data sets in TIFF format] | Yamaguchi S, Naganuma M, Nishizawa T, Kusakizako T, Tomari Y, Nishimasu H, Nureki O [Pubmed: 35768503] [DOI: 10.1038/s41586-022-04790-2] |
1.4 TB | 3.3 Å | |
2023-12-11 | SpCas9 bound to 8 nucleotide complementary DNA substrate [multiple data sets in TIFF and DM4 formats] | Pacesa M, Loeff L, Querques I, Muckenfuss LM, Sawicka M, Jinek M [Pubmed: 36002571] [DOI: 10.1038/s41586-022-05114-0] |
1.4 TB | 4.14 Å | |
2021-11-16 | The cryo-EM structure of the CENP-A nucleosome in complex with the phosphorylated CENP-C:: CENP-A nucleosome in complex with phosphorylated CENP-C C-terminal domain(601-864) [6533 multi-frame micrographs composed of 50 frames each in TIFF format] | Ariyoshi M, Makino F, Watanabe R, Nakagawa R, Kato T, Namba K, Arimura Y, Fujita R, Kurumizaka H, Okumura EI, Hara M, Fukagawa T [Pubmed: 33463726] [DOI: 10.15252/embj.2020105671] |
1.4 TB | 6.8 Å | |
2023-01-16 | Structure of the active Gi-coupled human lysophosphatidic acid receptor 1 complexed with a potent agonist [6228 multi-frame micrographs composed of 48 frames each in TIFF format] | Akasaka H, Tanaka T, Sano FK, Matsuzaki Y, Shihoya W, Nureki O [Pubmed: 36109516] [DOI: 10.1038/s41467-022-33121-2] |
1.4 TB | 3.5 - 5.6 Å | |
2022-11-28 | Cryo-EM Structure of Formate Dehydrogenase 1 from Methylorubrum extorquens AM1 [7650 multi-frame micrographs composed of 40 frames each in TIFF format] | Yoshikawa T, Makino F, Miyata T, Suzuki Y, Tanaka H, Namba K, Kano K, Sowa K, Kitazumi Y, Shirai O [Pubmed: 35535582] [DOI: 10.1039/d2cc01541b] |
1.4 TB | 2.19 Å | |
2022-07-12 | Human Kv1.3 [multiple data sets in TIFF format] | Meyerson JR, Selvakumar P [Pubmed: 35788586] [DOI: 10.1038/s41467-022-31285-5] |
1.4 TB | 2.89 Å | |
2023-03-17 | FMC63 scFv in complex with soluble CD19 [multiple data sets in TIFF format] | Meyerson JR, He C [Pubmed: 36867678] [DOI: 10.1126/sciimmunol.adf1426] |
1.4 TB | 3.05 Å | |
2022-04-22 | Cryo-EM structure of human U2 snRNP after ATP-dependent remodeling [multiple data sets in TIFF and MRCS formats] | Tholen J, Galej WP, Weis F [Pubmed: 34822310] [DOI: 10.1126/science.abm4245] |
1.5 TB | 2.15 Å | |
2023-06-30 | E. coli 50S ribosome bound to SLC17 [multiple data sets in MRC and TIFF formats] | Seiple IB, Pellegrino J, Fraser JS, Lee DJ | 1.5 TB | 2.3 Å | |
2021-11-26 | Cryo-electron microscopy reconstruction of human TAP Transporter bound to Herpes Simplex Virus 1 Inhibitor ICP47 [3875 multi-frame micrographs composed of 50 frames each in TIFF format] | Oldham ML, Grigorieff N, Chen J [Pubmed: 27935481] [DOI: 10.7554/eLife.21829] |
1.5 TB | 3.97 Å | |
2023-06-19 | HIV-1 capsid lattice assembled on 30-nm liposome scaffolds in the presence of dNTPs [696 multi-frame micrographs composed of 50 frames each in TIFF format] | Highland CMH, Dick RAD [Pubmed: 37094124] [DOI: 10.1073/pnas.2220545120] |
1.5 TB | 3.5 Å | |
2023-01-20 | Movies for human CST-Pola-primase bound to 3xTEL DNA template [6252 multi-frame micrographs composed of 40 frames each in TIFF format] | He Q, Lin X, Chavez BL, Agrawal S, Lusk BL, Lim C [Pubmed: 35830881] [DOI: 10.1038/s41586-022-05040-1] |
1.5 TB | 3.61 - 3.62 Å |