오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
Release date | Imageset | Title | Authors and references | Size | Resolution |
---|---|---|---|---|---|
2022-01-28 | Anaplastic lymphoma kinase (ALK) extracellular fragment of ligand binding region 648-1025 in complex with AUG-alpha [multiple data sets in TIFF and MRC formats] | Reshetnyak AV, Myasnikov AG, Kalodimos CG [Pubmed: 34819673] [DOI: 10.1038/s41586-021-04140-8] |
10.2 TB | 2.27 Å | |
2023-01-03 | Apo C-terminal half of LRRK2 (I2020T) bound to microtubule [2379 multi-frame micrographs composed of 50 frames each in TIFF format] | Matyszewski M, Leschziner AE [Pubmed: 36510024] [DOI: 10.1038/s41594-022-00863-y] |
643.9 GB | 7.0 Å | |
2024-02-28 | Apo Malacoceros FaNaC1 in lipid nanodiscs [multiple data sets in TIFF format] | Kalienkova V, Dandamudi M, Paulino C, Lynagh T [Pubmed: 38337033] [DOI: 10.1038/s41594-023-01198-y] |
1013.1 GB | 2.7 Å | |
2023-01-26 | Apo-ChRmine in MSP1E3D1 lipid nanodisc [5339 multi-frame micrographs composed of 50 frames each in TIFF format] | Tucker KCT, Brohawn SGB [Pubmed: 35977941] [DOI: 10.1038/s41467-022-32441-7] |
3.5 TB | 4.1 Å | |
2019-12-20 | Apo-state Streptavidin [multiple data sets in MRCS format] | Han Y, Fan X, Wang H, Zhao F, Tully CG, Kong J, Yao N, Yan N [Pubmed: 31879346] [DOI: 10.1073/pnas.1919114117] |
922.4 GB | 2.6 Å | |
2021-11-15 | Apoferritin 1.7% glycerol, 200kV [1707 multi-frame micrographs composed of 113 frames each in TIFF format] | Basanta B, Hirschi M, Lander GC [Pubmed: 34981768] [DOI: 10.1107/S2059798321012110] |
708.2 GB | 2.3 Å | |
2021-11-15 | Apoferritin 20% glycerol, 200kV [2254 multi-frame micrographs composed of 110 frames each in TIFF format] | Basanta B, Hirschi M, Lander GC [Pubmed: 34981768] [DOI: 10.1107/S2059798321012110] |
875.6 GB | 2.3 Å | |
2021-11-15 | Apoferritin 20% glycerol, 300kV [1859 multi-frame micrographs composed of 35 frames each in TIFF format] | Basanta B, Hirschi MM, Grotjahn DA, Lander GC [Pubmed: 34981768] [DOI: 10.1107/S2059798321012110] |
477.7 GB | 2.1 Å | |
2023-02-28 | Apoferritin on EG-grid [7500 multi-frame micrographs composed of 64 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
841.1 GB | 1.29 Å | |
2021-02-19 | Apoferritin structure at 1.36 angstrom resolution determined from a 300 kV Titan Krios G3i electron microscope with Falcon4 detector [7734 multi-frame micrographs composed of 40 frames each in MRC format] | Zhang K, Pintilie GD, Li S, Schmid MF, Chiu W [Pubmed: 33139928] [DOI: 10.1038/s41422-020-00432-2] |
3.7 TB | 1.36 Å | |
2022-07-27 | Apoferritin structure at 1.46 angstrom resolution by CryoARM300II equipped with Apollo [7000 multi-frame micrographs composed of 24 frames each in TIFF format] | Bammes B, Spilman M, Sakamoto M, Fukumura T, Konyuba Y, Okunish E | 1.1 TB | 1.47 Å | |
2020-12-02 | Apoferritin tilt series and frame series used to benchmark the resolution of both data types in M [multiple data sets in TIFF format] | Tegunov D, Xue L, Dienemann C, Cramer P, Mahamid J [Pubmed: 33542511] [DOI: 10.1038/s41592-020-01054-7] |
39.6 GB | 2.3 Å | |
2018-03-09 | Apoferritin tutorial dataset for cisTEM [20 multi-frame micrographs composed of 50 frames each in MRC format] | Grant T, Rohou A, Grigorieff N [Pubmed: 29513216] [DOI: 10.7554/elife.35383] |
5.5 GB | — | |
2021-10-19 | Apoferritin, TMV and T20S proteasome in nanofluidic channels [multiple data sets in TIFF format] | Huber ST, Sarajlic E, Huijink R, Weis F, Evers WH, Jakobi AJ [Pubmed: 35060902] [DOI: 10.7554/eLife.72629] |
308.3 GB | 3.0 - 5.4 Å | |
2023-05-26 | Archaeal DNA ligase and heterotrimeric PCNA with ligatable nicked DNA [multiple data sets in TIFF format] | Sverzhinsky A, Pascal JM [Pubmed: 34838188] [DOI: 10.1016/j.str.2021.11.002] |
5.4 TB | 4.2 - 4.38 Å | |
2023-05-23 | Archaeal DNA ligase and heterotrimeric PCNA with non-ligatable nicked DNA [3014 multi-frame micrographs composed of 37 frames each in TIFF format] | Sverzhinsky A, Pascal JM [Pubmed: 34838188] [DOI: 10.1016/j.str.2021.11.002] |
2.1 TB | 4.16 Å | |
2020-11-20 | Architecture of a catalytically active homotrimeric plant cellulose synthase complex [multiple data sets in TIFF format] | Purushotham PP, Ho RH, Zimmer JZ [Pubmed: 32646917] [DOI: 10.1126/science.abb2978] |
3.4 TB | 3.5 Å | |
2022-08-08 | Architecture of the human erythrocyte ankyrin-1 complex [multiple data sets in TIFF, MRC and MRCS formats] | Vallese F, Clarke OB [Pubmed: 35835865] [DOI: 10.1038/s41594-022-00792-w] |
5.2 TB | 2.4 Å | |
2021-11-15 | Arrangements of proteins at reconstituted synaptic vesicle fusion sites depend on membrane separation. [multiple data sets in MRC format] | Ginger L, Malsam J, Sonnen A.F.P., Morado D, Scheutzow A, Söllner T.H., Briggs J.A.G. [Pubmed: 32860428] [DOI: 10.1002/1873-3468.13916] |
70.0 GB | — | |
2023-03-02 | Arthrobacter phage Bridgette [4303 multi-frame micrographs composed of 40 frames each in TIFF format] | Podgorski JM [Pubmed: 36649709] [DOI: 10.1016/j.str.2022.12.012] |
1.6 TB | 4.0 Å | |
2016-09-21 | Asymmetric cryo-EM reconstruction of phage MS2 reveals genome structure in situ [751 micrographs in MRC format] | Koning RI, Gomez-Blanco J, Akopjana I, Vargas J, Kazaks A, Tars K, Carazo JM, Koster AJ [Pubmed: 27561669] [DOI: 10.1038/ncomms12524] |
46.9 GB | 5.0 - 10.5 Å | |
2022-01-31 | Asymmetric structures of the uncleaved full-length HIV-1 envelope glycoprotein trimer [multiple data sets in MRC and BIG DATA VIEWER HDF5 formats] | Zhang S, Wang KY, Wang WL, Chen S, Sodroski JG, Mao Y [Pubmed: 34549974] [DOI: 10.1128/JVI.00529-21] |
4.0 TB | 4.1 - 4.7 Å | |
2020-05-27 | Atomic resolution structure of apoferritin [3370 multi-frame micrographs composed of 434 frames each in EER format] | Nakane T, Kotecha A, Sente A, McMullan G, Masiulis S, Brown PMGE, Grigoras IT, Malinauskaite L, Malinauskas T, Miehling J, Uchański T, Yu L, Karia D, Pechnikova EV, de Jong E, Keizer J, Bischoff M, McCormack J, Tiemeijer P, Hardwick SW, Chirgadze DY, Murshudov G, Aricescu AR, Scheres SHW [Pubmed: 33087931] [DOI: 10.1038/s41586-020-2829-0] |
538.1 GB | 1.22 Å | |
2021-02-12 | Atomic resolution structure of apoferritin from Titan Mono/BCorr microscope [43292 multi-frame micrographs composed of 40 frames each in MRC format] | Yip KM, Fischer N, Paknia E, Chari A, Stark H [Pubmed: 33087927] [DOI: 10.1038/s41586-020-2833-4] |
18.7 TB | 1.15 - 1.56 Å | |
2022-04-19 | Atomic structure of Lanreotide nanotubes revealed by cryo-EM [stack of 631121 particles in MRCS format] | Pieri L, Wang F, Bressanelli S, Egelman EH, Paternostre M [Pubmed: 35042822] [DOI: 10.1073/pnas.2120346119] |
362.5 GB | 2.46 Å |