大阪大学のEMPIAR-PDBjチームでは、アジアの電顕研究者が、EMPIARデータベースに大きな電顕画像を転送するお手伝いをしています。 ネットワークでイギリスに転送する代わりに、ハードディスク自体を郵送・宅配便で大阪大学に送付、あるいは阪大のサーバまでネットワーク転送していただければ、こちらで仲介して登録サイトへの転送を代行します。 EMPIARへの登録を希望する方で、阪大へのデータ送付・転送をご希望の方は、まず、e-mail で、登録したい電顕画像データについて、ご相談ください。
Release date | Imageset | Title | Authors and references | Size | Resolution |
---|---|---|---|---|---|
2018-01-03 | Segment /nodes network analysis of the tubular system of the Neonate and Adult GP cardiomyocyte [167 multi-frame micrographs composed of 1 frames each in TIFF format] | Kashbour H, Taggart M, White K | 787.5 MB | — | |
2018-01-03 | Segment /nodes network analysis of the tubular system of the prenatal stages of GP cardiomyocyte [254 multi-frame micrographs composed of 1 frames each in TIFF format] | Kashbour H, Taggart M | 1.9 GB | — | |
2020-07-14 | Separating distinct macromolecular assemblies from cryo-EM images [2423 micrographs in MRC format] | Verbeke EJ, Zhou Y, Horton AP, Mallam AL, Taylor DW, Marcotte EM [Pubmed: 31726096] [DOI: 10.1016/j.jsb.2019.107416] |
128.5 GB | 4.0 - 19.0 Å | |
2019-05-21 | Serial Block Face SEM of HeLa cell pellet with 10 nm pixels and 50 nm slices (benchmark dataset) [518 micrographs in DM4 format] | Peddie CP, Jones ML, Collinson LM | 129.8 GB | — | |
2019-05-21 | Serial Block Face SEM of HeLa cell pellet with 5 nm pixels and 50 nm slices (benchmark dataset) [518 micrographs in DM4 format] | Peddie CP, Jones ML, Collinson LM | 129.8 GB | — | |
2018-01-17 | Serial Block Face Scanning Electron Micrscopy dataset of fetal day 64 guinea pig psoas muscle in transverse [93 micrographs in TIFF format] | Cocks ET [DOI: 10.1111/jmi.12676] |
264.4 MB | — | |
2018-01-17 | Serial Block Face Scanning Electron Micrscopy dataset of the optic lobe from an adult locust [100 micrographs in TIFF format] | Cocks ET [DOI: 10.1111/jmi.12676] |
3.4 GB | — | |
2020-11-06 | Serial cryoFIB/SEM reveals cytoarchitectural disruptions in Leigh syndrome patient cells [multiple data sets in TIFF format] | Zhu Y, Sun D, Schertel A, Fu X, Gwo P, Watson A, Zanetti-Domingues LC, Marisa L. Martin-Fernandez ML, Freyberg Z, Zhang P [Pubmed: 33096015] [DOI: 10.1016/j.str.2020.10.003] |
17.3 GB | — | |
2021-08-13 | Serial electron diffraction from hen egg-white lysozyme [34 diffraction images in BIG DATA VIEWER HDF5 format] | Bücker R, Hogan-Lamarre P, Mehrabi P, Schulz EC [Pubmed: 32081905] [DOI: 10.1038/s41467-020-14793-0] |
17.7 GB | 1.8 Å | |
2023-03-17 | Serial section electron tomography of a Leishmania haptomonad on the stomodeal valve in the sand fly [670 multi-frame micrographs composed of 1 frames each in MRC format] | Yanase R, Sunter JD [DOI: 10.1101/2022.10.28.514187] |
6.7 GB | — | |
2023-03-17 | Serial section electron tomography of a Leishmania haptomonad-like cell attached to plastic [718 multi-frame micrographs composed of 1 frames each in MRC format] | Yanase R, Sunter JD [DOI: 10.1101/2022.10.28.514187] |
10.8 GB | — | |
2022-03-15 | Seven benchmark datasets of instance segmentation of mitochondria: 6 diverse volume EM + 1 TEM (100 images) datasets [multiple data sets in TIFF format] | Narayan K, Conrad RW | 4.1 GB | — | |
2023-09-22 | Sheared F-actin raw data from Structures of the free and capped ends of the actin filament [multiple data sets in TIFF format] | Carman PJ, Barrie KR, Rebowski G, Dominguez R [Pubmed: 37228182] [DOI: 10.1126/science.adg6812] |
7.3 TB | 3.3 Å | |
2023-09-22 | Short and capped F-actin raw data from Structures of the free and capped ends of the actin filament [multiple data sets in TIFF format] | Carman PJ, Barrie KR, Rebowski G, Dominguez R [Pubmed: 37228182] [DOI: 10.1126/science.adg6812] |
7.4 TB | 2.26 - 3.26 Å | |
2024-03-16 | Single Particle Cryo Electron Microscopy Structure of the Dsl1 Complex bound to the SNAREs Sec20 and Use1 [multiple data sets in MRC format] | DAmico KD [Pubmed: 38196032] [DOI: 10.1038/s41594-023-01164-8] |
9.7 TB | 4.5 Å | |
2019-12-20 | Single Particle Cryo-EM Reconstructions of Human FACT in Complex with Partially Assembled Sub-nucleosomes [multiple data sets in TIFF, MRC and MRCS formats] | Liu YL, Zhou KZ, Zhang NZ, Wei HW, Tan YZT, Zhang ZZ, Carragher BC, Potter CSP, D'Arcy SD, Luger KL [Pubmed: 31775157] [DOI: 10.1038/s41586-019-1820-0] |
2.2 TB | 4.9 - 7.4 Å | |
2021-02-19 | Single Particle Cryo-EM Reconstructions of NCP-CHD4 complexes [multiple data sets in TIFF and MRC formats] | Farnung L, Cramer P [Pubmed: 32543371] [DOI: 10.7554/eLife.56178] |
721.2 GB | 3.1 - 4.0 Å | |
2022-08-15 | Single Particle CryoEM of inactive H2R in complex with Nb6M, NabFab, and anti-fab nanobody [8230 multi-frame micrographs composed of 68 frames each in TIFF format] | Robertson MJ, Skiniotis G [Pubmed: 36396979] [DOI: 10.1038/s41594-022-00859-8] |
4.4 TB | 3.0 Å | |
2022-08-15 | Single Particle CryoEM of inactive MOR bound to Mb6 and alvimopan [14635 multi-frame micrographs composed of 63 frames each in TIFF format] | Robertson MJ, Skiniotis G [Pubmed: 36396979] [DOI: 10.1038/s41594-022-00859-8] |
8.1 TB | 2.8 Å | |
2022-08-15 | Single Particle CryoEM of inactive SSTR2 bound to Nb6 [6846 multi-frame micrographs composed of 55 frames each in TIFF format] | Robertson MJ, Skiniotis G [Pubmed: 36396979] [DOI: 10.1038/s41594-022-00859-8] |
3.8 TB | 3.1 Å | |
2022-08-15 | Single Particle CryoEM of inactive hNTSR1 bound to Nb6 and SR antagonist [5818 multi-frame micrographs composed of 71 frames each in TIFF format] | Robertson MJ, Skiniotis G [Pubmed: 36396979] [DOI: 10.1038/s41594-022-00859-8] |
3.3 TB | 2.4 Å | |
2017-05-24 | Single Particle cryoEM Dataset of TcdA1 in prepore state (SPHIRE tutorial) [97 multi-frame micrographs composed of 24 frames each in MRCS format] | Gatsogiannis C, Roderer D, Raunser S [Pubmed: 28570515] [DOI: 10.3791/55448] |
72.8 GB | 3.5 Å | |
2023-09-12 | Single Particle cryoEM dataset of Type I-F CRISPR integration complex from Pseudomonas aeruginosa [9875 multi-frame micrographs composed of 50 frames each in TIFF format] | Santiago-Frangos A, Henriques WS, Wiegand T, Gauvin CC, Buyukyoruk M, Graham AB, Wilkinson RA, Triem L, Neselu K, Eng ET, Lander GC, Wiedenheft B [DOI: 10.1038/s41594-023-01097-2] |
5.7 TB | 3.48 Å | |
2024-02-09 | Single particle Cryo EM of the C-terminal half LRRK2 G2019S mutant bound to GZD-824 [7988 multi-frame micrographs composed of 40 frames each in EER format] | Villagran Suarez A, Leschziner A [Pubmed: 38039358] [DOI: 10.1126/sciadv.adk6191] |
7.0 TB | 2.99 Å | |
2024-03-21 | Single particle Cryo EM of the C-terminal half LRRK2 I2020T mutant bound to GZD-824 [8386 multi-frame micrographs composed of 50 frames each in EER format] | Villagran Suarez A, Leschziner A [Pubmed: 38039358] [DOI: 10.1126/sciadv.adk6191] |
7.4 TB | 3.1 Å |