Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2020-08-18 |  |
CryoEM structure of human CMG bound to AND-1 (CMGA) [1844 multi-frame micrographs composed of 23 frames each in MRC format] | Rzechorzek NJ, Hardwick SW, Chirgadze DY, Pellegrini L [Pubmed: 32453425] [DOI: 10.1093/nar/gkaa429] |
1.3 TB | 6.77 Å |
| 2022-06-17 |  |
E. coli 50S ribosome bound to compounds VM2 and VS1 [multiple data sets in TIFF and MRC formats] | Pellegrino J, Lee DJ, Fraser JS, Seiple IB | 1.3 TB | 2.29 Å |
| 2021-09-24 |  |
Oligo nucleosome fraction from metaphase chromosome in Xenopus egg extract (lot1) [multiple data sets in TIFF format] | Arimura YA, Funabiki HF [Pubmed: 34478647] [DOI: 10.1016/j.molcel.2021.08.010] |
1.3 TB | 3.5 - 5.5 Å |
| 2019-10-17 |  |
Cryo electron microscopy of TssA protein from T6SS of Vibrio cholerae. [multiple data sets in MRC and MRCS formats] | Nazarov S, Adaixo R, Basler M [Pubmed: 31403721] [DOI: 10.15252/embj.2018100825] |
1.3 TB | 3.9 Å |
| 2022-12-06 |  |
Single particle cryo-EM structure of RIG-I in complex with p1dsRNA [2460 multi-frame micrographs composed of 38 frames each in TIFF format] | Wang W, Pyle AM [Pubmed: 36272408] [DOI: 10.1016/j.molcel.2022.09.029] |
1.3 TB | 3.54 Å |
| 2024-02-28 |  |
FMRFa-bound Malacoceros FaNaC1 in lipid nanodiscs in presence of diminazene [multiple data sets in TIFF format] | Kalienkova V, Dandamudi M, Paulino C, Lynagh T [Pubmed: 38337033] [DOI: 10.1038/s41594-023-01198-y] |
1.3 TB | 3.0 Å |
| 2023-02-16 |  |
Enp1-TAP associated immature ribosomal particles from S. cerevisiae [multiple data sets in TIFF format] | Milkereit P, Pöll G [Pubmed: 36996028] [DOI: 10.1371/journal.pone.0283698] |
1.3 TB | 2.7 - 4.3 Å |
| 2024-02-28 |  |
ASSFVRIa-bound Malacoceros FaNaC1 in lipid nanodiscs [multiple data sets in TIFF format] | Kalienkova V, Dandamudi M, Paulino C, Lynagh T [Pubmed: 38337033] [DOI: 10.1038/s41594-023-01198-y] |
1.3 TB | 2.4 Å |
| 2021-12-23 |  |
cryoEM structure of Gq-coupled MRGPRX4 with small molecule agonist MS47134 [4506 multi-frame micrographs composed of 60 frames each in TIFF format] | Cao C, Fay J, Roth B [Pubmed: 34789874] [DOI: 10.1038/s41586-021-04126-6] |
1.3 TB | 2.6 Å |
| 2020-05-27 |  |
2.6 Angstrom cryo-EM reconstructions of HemQ from Geobacillus in the presence of substantial aberrations [257 multi-frame micrographs composed of 100 frames each in MRCS format] | Bromberg R, Guo Y, Borek D, Otwinowski Z [DOI: 10.1107/S2052252520002444] |
1.3 TB | 2.6 Å |
| 2020-04-03 |  |
BurrH bound to DNA Origami Goniometer [multiple data sets in MRC and MRCS formats] | Aksel T, Yu Z, Cheng Y, Douglas SM [Pubmed: 33077960] [DOI: 10.1038/s41587-020-0716-8] |
1.3 TB | 6.5 Å |
| 2024-05-10 |  |
Structure of human calcium-sensing receptor in complex with miniGi1 protein in detergent [15713 multi-frame micrographs composed of 50 frames each in MRC format] | Zuo H, Park J, Frangaj A, Ye J, Lu G, Manning JJ, Asher WB, Lu Z, Hu G, Wang L, Mendez J, Eng E, Zhang Z, Lin X, Grasucci R, Hendrickson WA, Clarke OB, Javitch JA, Conigrave AD, Fan QR [Pubmed: 38632411] [DOI: 10.1038/s41586-024-07331-1] |
1.3 TB | 3.6 Å |
| 2020-05-26 |  |
2.3 Angstrom cryo-EM reconstructions of HemQ from Geobacillus [258 multi-frame micrographs composed of 100 frames each in MRCS format] | Bromberg R, Guo Y, Borek D, Otwinowski Z [DOI: 10.1107/S2052252520002444] |
1.4 TB | 2.32 Å |
| 2020-09-11 |  |
Cryo-EM structures of remodeler-nucleosome intermediates suggest allosteric control through the nucleosome [719 multi-frame micrographs composed of 30 frames each in MRCS format] | Armache J-P, Gamarra N, Johnson SL, Leonard JD, Wu S, Narlikar G, Cheng Y [Pubmed: 31210637] [DOI: 10.7554/eLife.46057] |
1.4 TB | 3.39 Å |
| 2022-12-06 |  |
Single particle cryo-EM structure of RIG-I in complex with p2dsRNA [2586 multi-frame micrographs composed of 38 frames each in TIFF format] | Wang W, Pyle AM [Pubmed: 36272408] [DOI: 10.1016/j.molcel.2022.09.029] |
1.4 TB | 3.2 Å |
| 2023-03-02 |  |
Gordonia phage Ziko [5058 multi-frame micrographs composed of 30 frames each in TIFF format] | Podgorski JM [Pubmed: 36649709] [DOI: 10.1016/j.str.2022.12.012] |
1.4 TB | 2.6 Å |
| 2022-06-13 |  |
Structural and functional analyses of the tridomain-nonribosomal peptide synthetase FmoA3 for 4-methyloxazoline ring formation [1886 multi-frame micrographs composed of 39 frames each in TIFF format] | Katsuyama Y, Sone K, Harada A, Kawai S, Urano N, Adachi N, Moriya T, Kawasaki M, Shin-Ya K, Senda T, Ohnishi Y [Pubmed: 33783097] [DOI: 10.1002/anie.202102760] |
1.4 TB | 3.55 Å |
| 2019-02-01 |  |
Cryo electron micrographs of RNA polymerase II transcribing a nucleosome [2719 multi-frame micrographs composed of 40 frames each in TIFF format] | Kujirai T, Ehara H, Fujino Y, Shirouzu M, Sekine S, Kurumizaka H [Pubmed: 30287617] [DOI: 10.1126/science.aau9904] |
1.4 TB | 7.0 Å |
| 2024-05-14 |  |
β2-adrenergic receptor in complex with nucleotide-free G protein Gs [multiple data sets in TIFF format] | Papasergi-Scott MM, Eskici G, Seven AB, Skiniotis G [Pubmed: 38480881] [DOI: 10.1038/s41586-024-07153-1] |
1.4 TB | 3.2 - 4.2 Å |
| 2022-04-04 |  |
Cryo-EM micrographs of GABA(A)Rs purified from cells expressing human full-length alpha1, beta3 and gamma subunits, in presence of Ro15-4513 and megabody Mb38 [689 multi-frame micrographs composed of 65 frames each in MRC format] | Sente A, Desai R, Naydenova K, Malinauskas T, Jounaidi Y, Miehling J, Zhou X, Masiulis S, Hardwick SW, Chirgadze DY, Miller KW, Aricescu AR [Pubmed: 35355020] [DOI: 10.1038/s41586-022-04517-3] |
1.4 TB | 2.7 Å |
| 2024-05-01 |  |
Structure of human calcium-sensing receptor in complex with chimeric Gq (miniGisq) protein in detergent [16017 multi-frame micrographs composed of 50 frames each in MRC format] | Zuo H, Park J, Frangaj A, Ye J, Lu G, Manning JJ, Asher WB, Lu Z, Hu G, Wang L, Mendez J, Eng E, Zhang Z, Lin X, Grasucci R, Hendrickson WA, Clarke OB, Javitch JA, Conigrave AD, Fan QR [Pubmed: 38632411] [DOI: 10.1038/s41586-024-07331-1] |
1.4 TB | 3.5 Å |
| 2023-02-14 |  |
Mycobacterium phage Ogopogo [2220 multi-frame micrographs composed of 30 frames each in TIFF format] | Podgorski JM [Pubmed: 36649709] [DOI: 10.1016/j.str.2022.12.012] |
1.4 TB | 2.7 Å |
| 2022-11-14 |  |
Glycine and glutamate bound GluN1a-GluN2B NMDA receptors in non-active 1 conformation at 2.97 Angstrom resolution [7942 multi-frame micrographs composed of 30 frames each in TIFF format] | Chou THC, Furukawa FH [Pubmed: 35637422] [DOI: 10.1038/s41594-022-00772-0] |
1.4 TB | 2.97 Å |
| 2022-05-24 |  |
The complex of dephosphorylated human cystic fibrosis transmembrane conductance regulator (CFTR) and Lumacaftor (VX-809) [3191 multi-frame micrographs composed of 50 frames each in TIFF format] | Fiedorczuk K, Chen J [Pubmed: 34995514] [DOI: 10.1016/j.cell.2021.12.009] |
1.4 TB | 3.9 Å |
| 2022-07-18 |  |
CryoEM single particle dataset for psNb 2-10, 2-67 and 2-62 with spike protein [3168 multi-frame micrographs composed of 40 frames each in TIFF format] | Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y [Pubmed: 35738279] [DOI: 10.1016/j.celrep.2022.111004] |
1.4 TB | 3.6 Å |
