Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2023-06-19 |  |
HIV-1 capsid lattice assembled on 30-nm liposome scaffolds in the presence of assembly cofactor IP6; bound to lenacapavir [696 multi-frame micrographs composed of 50 frames each in TIFF format] | Highland CMH, Dick RAD [Pubmed: 37094124] [DOI: 10.1073/pnas.2220545120] |
1.8 TB | 3.1 Å |
| 2023-06-20 |  |
Cryo-EPty SPA at CSA of 1.03 mrad [29 micrographs in MRC format] | Pei X, Zhou L, Huang C, Boyce M, Kim JS, Liberti E, Hu Y, Sasaki T, Nellist PD, Zhang P, Stuart DI, Kirkland AI, Wang P [Pubmed: 37230988] [DOI: 10.1038/s41467-023-38268-0] |
262.0 MB | 37.2 Å |
| 2023-06-20 |  |
Cryo-EPty SPA at CSA of 3.26 mrad [22 micrographs in MRC format] | Pei X, Zhou L, Huang C, Boyce M, Kim JS, Liberti E, Hu Y, Sasaki T, Nellist PD, Zhang P, Stuart DI, Kirkland AI, Wang P [Pubmed: 37230988] [DOI: 10.1038/s41467-023-38268-0] |
2.1 GB | 32.9 Å |
| 2023-06-20 |  |
Cryo-EPty SPA at CSA of 4.83 mrad [22 micrographs in MRC format] | Pei X, Zhou L, Huang C, Boyce M, Kim JS, Liberti E, Hu Y, Sasaki T, Nellist PD, Zhang P, Stuart DI, Kirkland AI, Wang P [Pubmed: 37230988] [DOI: 10.1038/s41467-023-38268-0] |
3.9 GB | 18.6 Å |
| 2023-06-23 |  |
HIV-1 capsid lattice assembled on 30-nm liposome scaffolds in the presence of assembly cofactor IP6 (pH 6.2) [696 multi-frame micrographs composed of 50 frames each in TIFF format] | Highland CMH, Dick RAD [Pubmed: 37094124] [DOI: 10.1073/pnas.2220545120] |
2.0 TB | 3.3 Å |
| 2023-06-23 |  |
Hexameric human IgG3 Fc complex [stack of 1193 particles in MRC format] | Abendstein LA, Sharp THS | 25.9 GB | 14.0 Å |
| 2023-06-23 |  |
IgG3-C1-C4b complex on a lipid bilayer [stack of 2561 particles in MRC format] | Abendstein LA, Sharp THS | 160.1 GB | 29.0 - 44.0 Å |
| 2023-06-23 |  |
Unaligned and aligned cryo-EM micrographs of 82-kDa malate synthase G [multiple data sets in TIFF format] | Wu K.-P. [Pubmed: 36997036] [DOI: 10.1016/j.jsb.2023.107958] |
227.3 GB | 2.89 - 4.14 Å |
| 2023-06-23 |  |
Heterogeneous non-canonical nucleosomes predominate in yeast cells in situ [multiple data sets in TIFF and MRC formats] | Tan ZY, Cai S, Noble AJ, Chen JK, Shi J, Gan L [DOI: 10.7554/eLife.87672.1] |
711.4 GB | 24.0 Å |
| 2023-06-23 |  |
Dose weighted tilt series of ESCPE-1 membrane coats [57 tilt series in MRC format] | Castaño-Díez D [Pubmed: 37322239] [DOI: 10.1038/s41594-023-01014-7] |
117.4 GB | 10.0 Å |
| 2023-06-27 |  |
Unaligned cryo-EM micrographs of Human SHMT1 in complex with RNA [5450 multi-frame micrographs composed of 40 frames each in TIFF format] | Spizzichino S, Marabelli C, Chaves-Sanjuan A, Bolognesi M, Giardina G, Cutruzzola F | 3.9 TB | 3.52 Å |
| 2023-06-29 |  |
E. coli 50S ribosome bound to compound streptogramin analogs SA1 and SB1 [multiple data sets in TIFF and MRC formats] | Seiple IB, Pellegrino J, Fraser JS, Lee DJ | 1.3 TB | 2.35 Å |
| 2023-06-29 |  |
E. coli 50S ribosome bound to compound streptogramin analog SAB001 [multiple data sets in TIFF and MRC formats] | Pellegrino J, Fraser JS, Lee DJ, Seiple IB | 1.6 TB | 2.23 Å |
| 2023-06-29 |  |
E. coli 50S ribosome bound to compound SAB002 [multiple data sets in MRC and TIFF formats] | Pellegrino J, Seiple IB, Fraser JS, Lee DJ | 2.4 TB | 2.27 Å |
| 2023-06-29 |  |
E. coli 50S ribosome bound to streptogramin A analog 3142 [multiple data sets in MRC and TIFF formats] | Pellegrino J, Seiple IB, Fraser JS, Lee DJ | 5.3 TB | 1.91 Å |
| 2023-06-29 |  |
E. coli 50S ribosome bound to streptogramin A analog 3146 [multiple data sets in MRC and TIFF formats] | Pellegrino J, Seiple IB, Fraser JS, Lee DJ | 2.1 TB | 2.38 Å |
| 2023-06-29 |  |
E. coli 50S ribosome bound to D-linker solithromycin conjugate [multiple data sets in TIFF and MRC formats] | Seiple IB, Pellegrino J, Fraser JS, Lee DJ | 1.2 TB | 2.35 Å |
| 2023-06-29 |  |
E. coli 50S ribosome bound to L-linker solithromycin conjugate [multiple data sets in MRC and TIFF formats] | Seiple IB, Pellegrino J, Fraser JS, Lee DJ | 835.4 GB | 2.25 Å |
| 2023-06-29 |  |
E. coli 50S ribosome bound to solithromycin and VM1 [multiple data sets in MRC and TIFF formats] | Fraser JS, Seiple IB, Pellegrino J, Lee DJ | 3.2 TB | 1.99 Å |
| 2023-06-30 |  |
In situ X-ray assisted electron microscopy staining for large biological samples [33 multi-frame micrographs composed of 1 frames each in TIFF format] | Ströh S, Hammerschmith EW, Tank DW, Seung HS, Wanner AA [Pubmed: 36263931] [DOI: 10.7554/elife.72147] |
981.6 GB | — |
| 2023-06-30 |  |
CryoEM micrographs of the leptin–leptin receptor complex [multiple data sets in TIFF and MRC formats] | Saxton RA, Caveney NA, Garcia KC [Pubmed: 37002197] [DOI: 10.1038/s41467-023-37169-6] |
11.4 TB | 3.8 - 5.9 Å |
| 2023-06-30 |  |
Cryo electron tomography of the Bacterial Voltage-Gated Sodium Channel NaChBac in Liposomes [123 tilt series in TIFF format] | Chang SYS, Kudryashev M | 377.3 GB | 16.3 Å |
| 2023-06-30 |  |
Cryo-electron micrographs of hAQP2 in DDM [6592 multi-frame micrographs composed of 40 frames each in TIFF format] | Kamegawa A, Suzuki H, Fujiyoshi Y [Pubmed: 37315821] [DOI: 10.1016/j.jsb.2023.107984] |
1.2 TB | 2.89 Å |
| 2023-06-30 |  |
E. coli 50S ribosome bound to compound streptogramin A analog 3336 [multiple data sets in MRC and TIFF formats] | Pellegrino J, Seiple IB, Fraser JS, Lee DJ | 2.4 TB | 2.09 Å |
| 2023-06-30 |  |
E. coli 50S ribosome bound to SLC09 [multiple data sets in MRC and TIFF formats] | Pellegrino J, Seiple IB, Fraser JS, Lee DJ | 1.8 TB | 2.53 Å |
