Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2024-04-17 |  |
Cryo EM of ABC transporter KpsMT in complex with KpsE - Apo 2, Glycolipid 1 and Glycolipid 2 states [13961 multi-frame micrographs composed of 40 frames each in TIFF format] | Kuklewicz J [Pubmed: 38570679] [DOI: 10.1038/s41586-024-07248-9] |
3.6 TB | 3.3 - 3.5 Å |
| 2024-04-17 |  |
Cryo EM of ABC transporter KpsMT(E151Q) in complex with KpsE - ATP-bound state [multiple data sets in TIFF format] | Kuklewicz J [Pubmed: 38570679] [DOI: 10.1038/s41586-024-07248-9] |
2.3 TB | 3.1 - 3.3 Å |
| 2024-04-17 |  |
Spatial mapping of hepatic ER and mitochondria architecture reveals zonated remodeling in fasting and obesity [multiple data sets in TIFF format] | Parlakgul G | 2.9 TB | — |
| 2024-04-17 |  |
Data set of tilted cryo-EM images of human N-deacetylase/N-sulfotransferase 1 [multiple data sets in TIFF format] | Vallet SD, Annaval T, Wild R, Lortat-Jacob H [DOI: 10.1002/pgr2.8] |
1.9 TB | 4.5 Å |
| 2024-04-22 |  |
Cryo-EM Structures of human telomerase with TPP1-POT1 and telomerase H/ACA RNP [multiple data sets in TIFF and MRC formats] | Ghanim GEG, Sekne ZS, Balch SB, M. van Roon MVR, Nguyen THDN [Pubmed: 35201900] [DOI: 10.1126/science.abn6840] |
13.2 TB | 2.7 - 3.9 Å |
| 2024-03-25 |  |
Cryo electron microscopy of quinol-dependent Nitric Oxide Reductase (qNOR) from Alcaligenes xylosoxidans [5466 multi-frame micrographs composed of 43 frames each in EER format] | Flynn AJ, Antonyuk SV, Eady RR, Muench SP, Hasnain SS [Pubmed: 37296134] [DOI: 10.1038/s41467-023-39140-x] |
738.4 GB | 2.2 Å |
| 2024-04-11 |  |
Cryo-EM structure of P-Rex1-IP4 [multiple data sets in MRCS and TIFF formats] | Ravala SK, Adame-Garcia SR, Li S, Chen CL, Cianfrocco MA, Gutkind JS, Cash JN, Tesmer JJG [DOI: 10.7554/eLife.92822.1] |
2.7 TB | 4.1 Å |
| 2024-03-20 |  |
Directed evolution of and structural insights into antibody-mediated disruption of a stable receptor-ligand complex [592 micrographs in MRC format] | Pennington LF, Gasser P, Kleinboelting S, Zhang C, Skiniotis G, Eggel A, Jardetzky TS [Pubmed: 34862384] [DOI: 10.1038/s41467-021-27397-z] |
52.0 GB | 7.29 Å |
| 2024-04-24 |  |
Human methylenetetrahydrofolate reductase plus SAM [multiple data sets in EER format] | Blomgren LKM, Basle A, McCorvie TJ [DOI: 10.1038/s41467-024-47174-y] |
1012.6 GB | 2.91 Å |
| 2024-04-09 |  |
Structure of the Plasmodium falciparum 20S proteasome complexed with inhibitor TDI-8304 [29421 multi-frame micrographs composed of 75 frames each in TIFF format] | Hsu HC, Li H [Pubmed: 38097652] [DOI: 10.1038/s41467-023-44077-2] |
16.7 TB | 2.18 Å |
| 2024-03-22 |  |
Single-particle cryo-EM unaligned micrographs of NTD-directed neutralizing antibody 5-24 in complex with prefusion SARS-CoV-2 spike glycoprotein [9221 multi-frame micrographs composed of 50 frames each in TIFF format] | Cerutti G, Guo Y, Zhou T, Gorman J, Lee M, Rapp M, Reddem ER, Yu J, Bahna F, Bimela J, Huang Y, Katsamba PS, Liu L, Nair MS, Rawi R, Olia AS, Wang P, Zhang B, Chuang GY, Ho DD, Sheng Z, Kwong PD, Shapiro L [Pubmed: 33789084] [DOI: 10.1016/j.chom.2021.03.005] |
2.4 TB | 3.9 Å |
| 2024-04-17 |  |
Single-particle cryo-EM unaligned micrographs of NTD-directed neutralizing antibody 2-51 in complex with prefusion SARS-CoV-2 spike glycoprotein [13880 multi-frame micrographs composed of 50 frames each in TIFF format] | Cerutti G, Guo Y, Zhou T, Gorman J, Lee M, Rapp M, Reddem ER, Yu J, Bahna F, Bimela J, Huang Y, Katsamba PS, Liu L, Nair MS, Rawi R, Olia AS, Wang P, Zhang B, Chuang GY, Ho DD, Sheng Z, Kwong PD, Shapiro L [Pubmed: 33789084] [DOI: 10.1016/j.chom.2021.03.005] |
3.5 TB | 3.71 Å |
| 2024-04-03 |  |
Structure of the Plasmodium falciparum 20S proteasome beta-6 A117D mutant complexed with inhibitor WLW-vs [24086 multi-frame micrographs composed of 65 frames each in TIFF format] | Hsu HC, Li H [Pubmed: 38097652] [DOI: 10.1038/s41467-023-44077-2] |
11.3 TB | 2.58 Å |
| 2024-03-26 |  |
Cryo-EM micrographs of engineered encapsulin P3P4 [multiple data sets in MRC and MRCS formats] | Satler T, Jerala R | 69.3 GB | 3.1 Å |
| 2024-03-19 |  |
Unveiling the ultrastructural landscape of extracellular matrix via lift-out cryo-FIBSEM and cryo-ET [multiple data sets in TIFF and MRC formats] | Zens B., Fäßler F., Hansen J.M., Hauschild R., Datler J., Hodirnau V.V., Zheden V., Alanko J., Sixt M., Schur F.K.M. [DOI: 10.1083/jcb.202309125] |
183.0 GB | — |
| 2024-04-12 |  |
Cryo-electron tomography data of Emiliania huxleyi virus 201 for subtomogram averaging [283 tilt series in TIFF format] | Homola M, Büttner CR, Füzik T, Nováček J, Chaillet M, Förster F, Plevka P [DOI: 10.1101/2023.06.30.547180] |
294.8 GB | 13.0 Å |
| 2024-04-02 |  |
EMinsight: a tool to capture cryoEM microscope configuration and experimental outcomes for analysis and deposition [2605 multi-frame micrographs composed of 50 frames each in TIFF format] | Morris KL, Harrison PJ, Hatton D, Riggs S, Thiyagalingamc J | 1.2 TB | — |
| 2024-02-29 |  |
cryo-EM structure of rMRP2 in complex with probenecid [13827 multi-frame micrographs composed of 40 frames each in TIFF format] | Mazza TM, Roumeliotis TIR, Garitta EG, Drew DD, Rashid STR, Indiveri CI, Linton KJL, Choudhary JSC, Beis KB | 1.9 TB | 3.45 Å |
| 2024-02-29 |  |
cryo-EM structure of nucleotide-free rMRP2 [12785 multi-frame micrographs composed of 50 frames each in TIFF format] | Mazza TM, Roumeliotis TIR, Garitta EG, Drew DD, Rashid STR, Indiveri CI, Linton KJL, Choudhary JSC, Beis KB | 2.0 TB | 3.21 Å |
| 2024-03-22 |  |
Structural basis for directional rotation of the Salmonella flagellum [39332 multi-frame micrographs composed of 50 frames each in TIFF format] | Singh PK, Iverson TM | 9.0 TB | 3.4 - 6.7 Å |
| 2024-04-22 |  |
Cryo-EM structure of the complete inner kinetochore of the budding yeast point centromere [multiple data sets in EER and MRC formats] | Dendooven T, Zhang Z, Yang J, McLaughlin S, Schwabb J, Scheres S, Yatskevich S, Barford D [Pubmed: 37506202] [DOI: 10.1126/sciadv.adg7480] |
3.5 TB | 3.7 Å |
| 2024-02-28 |  |
Sulfolobus acidocaldarius s-layer SlaA cryoET dataset [multiple data sets in MRC format] | Gambelli L, McLaren MJ, Sanders K, Gaines M, Clark L, Gold VAM, Kattnig D, Sikora M, Hanus C, Isupov M, Daum B [Pubmed: 38251732] [DOI: 10.7554/eLife.84617] |
945.1 GB | 11.2 Å |
| 2024-04-15 |  |
Single-particle cryo-EM unaligned micrographs of NTD-directed neutralizing antibody 5-7 in complex with prefusion SARS-CoV-2 spike glycoprotein [6688 multi-frame micrographs composed of 60 frames each in TIFF format] | Cerutti G, Guo Y, Wang P, Nair MS, Wang M, Huang Y, Yu J, Liu L, Katsamba PS, Bahna F, Reddem ER, Kwong PD, Ho DD, Sheng Z, Shapiro L [Pubmed: 34706271] [DOI: 10.1016/j.celrep.2021.109928] |
1.6 TB | 3.5 Å |
| 2024-03-21 |  |
Single particle Cryo EM of the C-terminal half LRRK2 I2020T mutant bound to GZD-824 [8386 multi-frame micrographs composed of 50 frames each in EER format] | Villagran Suarez A, Leschziner A [Pubmed: 38039358] [DOI: 10.1126/sciadv.adk6191] |
7.4 TB | 3.1 Å |
| 2024-03-20 |  |
Cryo-electron microscopy Structure of the Human Cannabinoid Receptor CB2-Gi Signaling Complex [multiple data sets in TIFF format] | Xing C, Zhuang Y, Xu TH, Feng Z, Zhou XE, Chen M, Wang L, Meng X, Xue Y, Wang J, Liu H, McGuire TF, Zhao G, Melcher K, Zhang C, Xu HE, Xie XQ [Pubmed: 32004460] [DOI: 10.1016/j.cell.2020.01.007] |
2.5 TB | 3.2 Å |
