Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2022-09-09 |  |
Human NTCP in complex with YN69083 Fab [multiple data sets in TIFF format] | Park JH, Iwamoto M, Yun JH, Uchikubo-Kamo T, Son D, Jin Z, Yoshida H, Ohki M, Ishimoto N, Mizutani K, Oshima M, Muramatsu M, Wakita T, Shirouzu M, Liu K, Uemura T, Nomura N, Iwata S, Watashi K, Tame JRH, Nishizawa T, Lee W, Park SY [Pubmed: 35580630] [DOI: 10.1038/s41586-022-04857-0] |
5.5 TB | 3.3 Å |
| 2023-03-30 |  |
mouse ACE2 receptor bound to SARS-CoV-2 variant Omicron BA.4/5 Spike [7989 multi-frame micrographs composed of 1092 frames each in EER format] | Ni D, Myasnikov A, Stahlberg S, Lau K [DOI: 10.1371/journal.ppat.1011206] |
4.4 TB | 2.92 - 3.3 Å |
| 2023-03-30 |  |
human ACE2 receptor bound to SARS-CoV-2 variant Omicron BA.4/5 Spike [7254 multi-frame micrographs composed of 1092 frames each in EER format] | Ni D, Myasnikov A, Stahlberg S, Lau K [DOI: 10.1371/journal.ppat.1011206] |
4.1 TB | 2.92 Å |
| 2022-09-09 |  |
Cryo-EM structure of GH31 alpha-1,3-glucosidase from Lactococcus lactis subsp. cremoris [995 multi-frame micrographs composed of 50 frames each in TIFF format] | Ikegaya M, Moriya T, Adachi N, Kawasaki M, Park EY, Miyazaki T [Pubmed: 35293315] [DOI: 10.1016/j.jbc.2022.101827] |
911.2 GB | 2.73 Å |
| 2023-02-28 |  |
GroEL on EG-grid stored for 3 months after graphene oxidation [1209 multi-frame micrographs composed of 40 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
217.8 GB | 2.06 Å |
| 2022-09-09 |  |
Structure of SARS-CoV-2 membrane protein [multiple data sets in TIFF format] | Zhang Z, Ohto U, Shimizu T [Pubmed: 35931673] [DOI: 10.1038/s41467-022-32019-3] |
4.4 TB | 2.7 - 6.2 Å |
| 2023-06-23 |  |
Unaligned and aligned cryo-EM micrographs of 82-kDa malate synthase G [multiple data sets in TIFF format] | Wu K.-P. [Pubmed: 36997036] [DOI: 10.1016/j.jsb.2023.107958] |
227.3 GB | 2.89 - 4.14 Å |
| 2022-09-26 |  |
In situ cryo-electron tomography of autophagic structures in S. cerevisiae [84 tilt series in MRC format] | Bieber A, Capitanio C, Erdmann PS, Schulman BA, Baumeister W, Wilfling F [Pubmed: 36122245] [DOI: 10.1073/pnas.2209823119] |
249.0 GB | — |
| 2023-06-30 |  |
E. coli 50S ribosome bound to tiamulin and azithromycin [multiple data sets in MRC and TIFF formats] | Seiple IB, Pellegrino J, Fraser JS, Lee DJ | 734.4 GB | 2.29 Å |
| 2023-06-30 |  |
E. coli 50S ribosome bound to tiamulin and VS1 [multiple data sets in MRC and TIFF formats] | Pellegrino J, Seiple IB, Fraser JS, Lee DJ | 2.0 TB | 2.13 Å |
| 2023-06-30 |  |
E. coli 50S ribosome bound to SLC31 [multiple data sets in MRC and TIFF formats] | Seiple I, Pellegrino J, Fraser J, Lee DJ | 3.6 TB | 2.05 Å |
| 2023-06-30 |  |
E. coli 50S ribosome bound to SLC30 [multiple data sets in MRC and TIFF formats] | Seiple IB, Pellegrino J, Fraser JS, Lee DJ | 2.6 TB | 2.27 Å |
| 2023-06-30 |  |
E. coli 50S ribosome bound to SLC26 [multiple data sets in MRC and TIFF formats] | Seiple IB, Pellegrino J, Fraser JS, Lee DJ | 2.3 TB | 2.32 Å |
| 2023-06-30 |  |
E. coli 50S ribosome bound to SLC21 [multiple data sets in MRC and TIFF formats] | Seiple IB, Pellegrino J, Fraser JS, Lee DJ | 1.6 TB | 2.32 Å |
| 2023-06-30 |  |
E. coli 50S ribosome bound to SLC17 [multiple data sets in MRC and TIFF formats] | Seiple IB, Pellegrino J, Fraser JS, Lee DJ | 1.5 TB | 2.3 Å |
| 2023-06-30 |  |
E. coli 50S ribosome bound to SLC09 [multiple data sets in MRC and TIFF formats] | Pellegrino J, Seiple IB, Fraser JS, Lee DJ | 1.8 TB | 2.53 Å |
| 2023-06-30 |  |
E. coli 50S ribosome bound to compound streptogramin A analog 3336 [multiple data sets in MRC and TIFF formats] | Pellegrino J, Seiple IB, Fraser JS, Lee DJ | 2.4 TB | 2.09 Å |
| 2023-02-22 |  |
Cryo-EM data of alpha-synuclein A53T fibril induced by CaCl2 [1799 micrographs in MRC format] | Wu KP | 158.0 GB | 2.7 Å |
| 2023-02-01 |  |
Cryo-EM data of alpha-synuclein A53T fibril [2663 micrographs in MRC format] | Wu KP, Huang JYC | 233.8 GB | 3.4 Å |
| 2023-06-29 |  |
E. coli 50S ribosome bound to solithromycin and VM1 [multiple data sets in MRC and TIFF formats] | Fraser JS, Seiple IB, Pellegrino J, Lee DJ | 3.2 TB | 1.99 Å |
| 2023-06-29 |  |
E. coli 50S ribosome bound to L-linker solithromycin conjugate [multiple data sets in MRC and TIFF formats] | Seiple IB, Pellegrino J, Fraser JS, Lee DJ | 835.4 GB | 2.25 Å |
| 2023-06-29 |  |
E. coli 50S ribosome bound to D-linker solithromycin conjugate [multiple data sets in TIFF and MRC formats] | Seiple IB, Pellegrino J, Fraser JS, Lee DJ | 1.2 TB | 2.35 Å |
| 2023-06-29 |  |
E. coli 50S ribosome bound to streptogramin A analog 3146 [multiple data sets in MRC and TIFF formats] | Pellegrino J, Seiple IB, Fraser JS, Lee DJ | 2.1 TB | 2.38 Å |
| 2023-06-29 |  |
E. coli 50S ribosome bound to streptogramin A analog 3142 [multiple data sets in MRC and TIFF formats] | Pellegrino J, Seiple IB, Fraser JS, Lee DJ | 5.3 TB | 1.91 Å |
| 2022-09-20 |  |
Cryo-EM dataset of Candida albicans CIII, inhibitor free [3634 micrographs in MRC format] | Di Trani J, Rubinstein JL [Pubmed: 34525326] [DOI: 10.1016/j.str.2021.08.006] |
227.1 GB | 3.0 Å |
