EMPIAR-10007 - Low-contrast particle stack for HIV-1 Env gp160 precursor (Spider stack) [stack of 670023 particles in SPIDER format]

EMPIAR-10007

Low-contrast particle stack for HIV-1 Env gp160 precursor (Spider stack) [stack of 670023 particles in SPIDER format]

Publication:

Molecular architecture of the uncleaved HIV-1 envelope glycoprotein trimer.

Mao Y, Wang L, Gu C, Herschhorn A, Desormeaux A, Finzi A, Xiang SH, Sodroski JG

Pnas 110 (2013) 12438-12443

PMID: 23757493

DOI: doi:10.1073/pnas.1307382110

Related EMDB entry:

EMD-5447

Deposited:

2014-02-20

Released:

2014-02-21

Last modified:

2014-02-21

Imageset size:

164.22 GB

Imageset DOI:

10.6019/EMPIAR-10007

Experimental metadata:

Download xml json

Version history:

2015-10-27

REL

Restructured the entry directory to have "data" and ".private".

Contains:

picked particles - multiframe - unprocessed

Image Sets

1. U115 raw particle images

Category:

picked particles - multiframe - unprocessed

Image format:

SPIDER

No. of images or tilt series:

670023

Image size:

(256, 256)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(0.74688, 0.74688)

Details:

All raw particle images in the *.dat SPIDER stack files were only inverted in contrast without any further processing such as filtering or binning. Defocus information is provided in the sel_group.dat files.

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Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

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Ubiquitinated histone H2B as gatekeeper of the nucleosome acidic patch.

Hicks CW, Rahman S, Gloor SL, Fields JK, Husby NL, Vaidya A, Maier KE, Morgan M, Keogh MC, Wolberger C. (2024)

Molecular recognition of an odorant by the murine trace amine-associated receptor TAAR7f.

Gusach A, Lee Y, Khoshgrudi AN, Mukhaleva E, Ma N, Koers EJ, Chen Q, Edwards PC, Huang F, Kim J, Mancia F, Veprintsev DB, Vaidehi N, Weyand SN, Tate CG. (2024)

The novel ribosome biogenesis inhibitor usnic acid blocks nucleolar pre-60S maturation.

Kofler L, Grundmann L, Gerhalter M, Prattes M, Merl-Pham J, Zisser G, Grishkovskaya I, Hodirnau VV, Vareka M, Breinbauer R, Hauck SM, Haselbach D, Bergler H. (2024)

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