Raw unaligned frames were preprocessed in Warp to generate tilt series stacks. Corresponding reference files in other directories under same base name (tilt series, mdocs, tomograms). Four directories included in subfolders. MIM019_2 and MIM019_3 are from mtGFP mouse embryonic fibroblasts (untreated). MIM029_3 and MIM032_1 are from mtGFP mouse embryonic fibroblasts treated with degraded Thapsigargin (500nm) for 8 hours- condition uncertain.
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The tilt series stacks (.st file) and rawtlt files (.rawtlt file) were created from Warp with the input of tilt-corrected mdoc files. Raw mdoc files are listed in the Tilt_series_mdoc folder. Tilt series stacks are then aligned in IMOD. MIM019_2 and MIM019_3 are from mtGFP mouse embryonic fibroblasts (untreated). MIM029_3 and MIM032_1 are from mtGFP mouse embryonic fibroblasts treated with degraded Thapsigargin (500nm) for 8 hours- condition uncertain.
Files:
Available download options:
Archives and downloads the selected files into an uncompressed zip file.
Depending on the number and size of files to be downloaded, this can take an enormous amount of time.
Also, this feature is unstable and may not work properly, and checksums of downloaded files are not verified.
We recommend using rsync, aspera, globus, etc.
Download a list of selected files.
It is possible to download files by specifying the file list with rsync command, etc.
Bin4 tomograms are reconstructed from Warp after IMOD alignment. Particle coordinates for ATP synthase are provided in particle_list folder
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Archives and downloads the selected files into an uncompressed zip file.
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Also, this feature is unstable and may not work properly, and checksums of downloaded files are not verified.
We recommend using rsync, aspera, globus, etc.
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It is possible to download files by specifying the file list with rsync command, etc.
Bin 6 Warp reconstructed tomograms. Subset of MIM19_2, MIM019_3 used in thickness measurement analysis.
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Bin 8 Warp reconstructed tomograms. Subset of MIM19_2, MIM019_3 used to generated organelle membrane segmentation. Associated segmentations files can be found in data/morphometrics_thickness/Voxel_segmentations. Associated triangulated surface meshes can be found in /data/morphometrics_thickness/Triangulated_surface_mesh.
Files:
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Archives and downloads the selected files into an uncompressed zip file.
Depending on the number and size of files to be downloaded, this can take an enormous amount of time.
Also, this feature is unstable and may not work properly, and checksums of downloaded files are not verified.
We recommend using rsync, aspera, globus, etc.
Download a list of selected files.
It is possible to download files by specifying the file list with rsync command, etc.
Raw unaligned frames were preprocessed in Warp to generate tilt series stacks
Files:
Available download options:
Archives and downloads the selected files into an uncompressed zip file.
Depending on the number and size of files to be downloaded, this can take an enormous amount of time.
Also, this feature is unstable and may not work properly, and checksums of downloaded files are not verified.
We recommend using rsync, aspera, globus, etc.
Download a list of selected files.
It is possible to download files by specifying the file list with rsync command, etc.
The tilt series stacks (.st file) and rawtlt files (in Tilt_series_rawtlt) were created from Warp with the input of tilt-corrected mdoc files. Raw mdoc files are listed in the yeast/tilt_series_mdocs folder. Tilt series stacks are then aligned in IMOD.
Files:
Available download options:
Archives and downloads the selected files into an uncompressed zip file.
Depending on the number and size of files to be downloaded, this can take an enormous amount of time.
Also, this feature is unstable and may not work properly, and checksums of downloaded files are not verified.
We recommend using rsync, aspera, globus, etc.
Download a list of selected files.
It is possible to download files by specifying the file list with rsync command, etc.
Bin 6 tomograms are reconstructed from Warp after IMOD alignment.
Files:
Available download options:
Archives and downloads the selected files into an uncompressed zip file.
Depending on the number and size of files to be downloaded, this can take an enormous amount of time.
Also, this feature is unstable and may not work properly, and checksums of downloaded files are not verified.
We recommend using rsync, aspera, globus, etc.
Download a list of selected files.
It is possible to download files by specifying the file list with rsync command, etc.
voxel segmentations from reconstructed tomograms at bin 8. These voxel segmentations were then input into surface morphometrics to generate triangulated surface meshes.
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Archives and downloads the selected files into an uncompressed zip file.
Depending on the number and size of files to be downloaded, this can take an enormous amount of time.
Also, this feature is unstable and may not work properly, and checksums of downloaded files are not verified.
We recommend using rsync, aspera, globus, etc.
Download a list of selected files.
It is possible to download files by specifying the file list with rsync command, etc.
