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EMPIAR-13033
Single particle cryoEM of Jumbophage Gp316/JADA protein [15625 multi-frame micrographs composed of 50 frames each in EER format]
Publication:

Molecular basis for anti-jumbo phage immunity by AVAST Type 5

Muralidharan A, Costa AR, Fierlier D, van den Berg DF, van den Bossche H, Zoumaro-Djayoon AD, Pabst M, Pacesa M, Correia BE, Brouns SJJ

bioRxiv (2025)

Related EMDB entry:
EMD-54139
Deposited:
2025-10-07
Released:
2025-12-07
Last modified:
2025-12-07
Imageset size:
6.38 TB
Imageset DOI:
10.6019/EMPIAR-13033
Experimental metadata:
Download xml json
Contains:
  • micrographs - multiframe
Image Sets
1. Unaligned multi-frame movies of Jumbophage Gp316/JADA protein homodimer
Category:
micrographs - multiframe
Image format:
EER
No. of images or tilt series:
15625
Image size:
(4096, 4096)
Pixel type:
32 BIT FLOAT
Pixel spacing:
(0.726, 0.726)
Details:
300 kV, 2.7 mm, 50 e/A^2 exposure
Files:
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Citations
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Unbend, correction of local beam-induced sample motion in cryo-EM images using a 3D spline model.
Kong L, Zottig X, Elferich J, Grigorieff N. (2026)
Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.
Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)
Dual site targeting of the bacterial 70S ribosome by tetracyclines.
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CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.
Gyawali R, Dhakal A, Wang L, Cheng J. (2026)
Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.
Jones HN, Deshmukh A, Pande K. (2026)
CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting
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Point cloud deformation modeling for particle selection following cryo-EM 2D classification.
Wang X, Mo Z, Li F, Zhang F, Wan X. (2026)
ICECREAM: high-fidelity equivariant cryo-electron tomography.
Kishore V, Debarnot V, Righetto RD, Engel BD, Dokmanić I. (2026)
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