EMPIAR-11843
Cryo electron tomography image- and volume-series subtomograms of chloramphenicol-treated mycoplasma pneumoniae [multiple data sets in MRCS and MRC formats]
Publication:

Learning structural heterogeneity from cryo-electron sub-tomograms with tomoDRGN

Powell BM, Davis JH

bioRxiv (2023)

Related EMDB entry:
Deposited:
2023-05-18
Released:
2024-03-18
Last modified:
2024-03-18
Imageset size:
788.54 GB
Imageset DOI:
Experimental metadata:
Download xml json
Contains:
  • picked particles - multiframe - processed
  • subtomograms
1. Image tilt-series of ribosomes extracted from EMPIAR-10499 at intramolecular scale, small box, large pixel
Category:
picked particles - multiframe - processed
Image format:
MRCS
No. of images or tilt series:
22291
Image size:
(96, 96)
Pixel type:
32 BIT FLOAT
Pixel spacing:
(3.71, 3.71)
Details:
Particle positions in starfiles/10499_22k_box96_angpix3.7.star
Images are tilt-series of particles extracted in Warp/M using the "extract subtomograms > image-series" option
Files:
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2. Image tilt-series subtomograms of ribosomes extracted from EMPIAR-10499 at intramolecular scale, medium box, small pixel
Category:
picked particles - multiframe - processed
Image format:
MRCS
No. of images or tilt series:
22291
Image size:
(210, 210)
Pixel type:
32 BIT FLOAT
Pixel spacing:
(1.71, 1.71)
Details:
Particle positions in starfiles/10499_22k_box210_angpix1.7.star
Images are tilt-series of particles extracted in Warp/M using the "extract subtomograms > image-series" option
Files:
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3. Image tilt-series subtomograms of ribosomes extracted from EMPIAR-10499 at intramolecular scale, large box, small pixel
Category:
picked particles - multiframe - processed
Image format:
MRCS
No. of images or tilt series:
22291
Image size:
(352, 352)
Pixel type:
32 BIT FLOAT
Pixel spacing:
(1.71, 1.71)
Details:
Particle positions in starfiles/10499_22k_box352_angpix1.7.star
Images are tilt-series of particles extracted in Warp/M using the "extract subtomograms > image-series" option
Files:
Loading...
4. Image tilt-series subtomograms of ribosomes extracted from EMPIAR-10499 at intermolecular scale
Category:
picked particles - multiframe - processed
Image format:
MRCS
No. of images or tilt series:
22291
Image size:
(200, 200)
Pixel type:
32 BIT FLOAT
Pixel spacing:
(3.71, 3.71)
Details:
Particle positions in starfiles/10499_22k_box200_angpix3.7.star
Images are tilt-series of particles extracted in Warp/M using the "extract subtomograms > image-series" option
Files:
Loading...
5. Volumetric subtomograms of ribosomes extracted from EMPIAR-10499 at intramolecular scale
Category:
subtomograms
Image format:
MRC
No. of images or tilt series:
22291
Image size:
(64, 64)
Pixel type:
32 BIT FLOAT
Pixel spacing:
(6.0, 6.0)
Details:
Particle positions in starfiles/10499_22k_box64_angpix6_volumeseries.star
Particles are volumetric subtomograms extracted in Warp/M using the "extract subtomograms > volume-series" option
Files:
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6. Volumetric subtomograms of ribosome•SecDF complex extracted from EMPIAR-10499 at intramolecular scale
Category:
subtomograms
Image format:
MRC
No. of images or tilt series:
380
Image size:
(192, 192)
Pixel type:
32 BIT FLOAT
Pixel spacing:
(4.0, 4.0)
Details:
Particle positions in starfiles/10499_22k_box192_angpix4_volumeseries_secdfribos.star
Particles are volumetric subtomograms extracted in Warp/M using the "extract subtomograms > volume-series" option
Files:
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Files:
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