EMPIAR-11399 - Targeted volume Correlative Light and Electron Microscopy of environmental marine microorganisms [1937 micrographs in TIFF format]

EMPIAR-11399

Targeted volume Correlative Light and Electron Microscopy of environmental marine microorganisms [1937 micrographs in TIFF format]

Publication:

Targeted volume Correlative Light and Electron Microscopy of an environmental marine microorganism

Mocaer K, Mizzon G, Gunkel M, Halavatyi A, Steyer AM, Oorschot V, Schorb M, Le Kieffre C, Yee DP, Chevalier F, Gallet B, Decelle J, Schwab Y, Ronchi P

(---)

DOI: 10.1101/2023.01.27.525698

Related EMDB entry:

Deposited:

2023-01-20

Released:

2023-07-18

Last modified:

2023-07-18

Imageset size:

14.54 GB

Imageset DOI:

10.6019/EMPIAR-11399

Experimental metadata:

Download xml json

Contains:

micrographs - single frame

Image Sets

1. Aligned FIB-SEM slices

Category:

micrographs - single frame

Image format:

TIFF

No. of images or tilt series:

1937

Image size:

(2718, 2718)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(80.0, 80.0)

Details:

Isotropic FIB-SEM volume, aligned using AMST, cropped to the image areas containing information.

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Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

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Citations

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Ito F, Alvarez-Cabrera AL, Liu S, Yang H, Shiriaeva A, Zhou ZH, Chen XS. (2023)

The 2023 Nucleic Acids Research Database Issue and the online molecular biology database collection.

Rigden DJ, Fernández XM. (2023)

EMPIAR: the Electron Microscopy Public Image Archive.

Iudin A, Korir PK, Somasundharam S, Weyand S, Cattavitello C, Fonseca N, Salih O, Kleywegt GJ, Patwardhan A. (2023)

CLEMSite, a software for automated phenotypic screens using light microscopy and FIB-SEM.

Serra Lleti JM, Steyer AM, Schieber NL, Neumann B, Tischer C, Hilsenstein V, Holtstrom M, Unrau D, Kirmse R, Lucocq JM, Pepperkok R, Schwab Y. (2023)

Structure of a RecT/Redβ family recombinase in complex with a duplex intermediate of DNA annealing.

Caldwell BJ, Norris AS, Karbowski CF, Wiegand AM, Wysocki VH, Bell CE. (2022)

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