EMPIAR-13715 - SBF-SEM analysis of atg18-mNG:loxP parasite architecture [multiple data sets in DM3 format]

EMPIAR-13715

SBF-SEM analysis of atg18-mNG:loxP parasite architecture [multiple data sets in DM3 format]

Publication:

A PROPPIN links V-ATPase assembly to endocytic membrane dynamics in malaria parasites

Schmitz Y, Sengupta M, Schneider C, Ziesmann T, Hellmold F, Distler U, Reimer R, Matz JM

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DOI: 10.64898/2026.04.14.718606

Related EMDB entry:

Deposited:

2026-06-19

Released:

2026-07-01

Last modified:

2026-07-01

Imageset size:

108.74 GB

Imageset DOI:

10.6019/EMPIAR-13715

Experimental metadata:

Download xml json

Contains:

micrographs - single frame

Image Sets

1. Unaligned SBF-SEM series of Plasmodium falciparum atg18-mNG:loxP mutant, RAP-treated

Category:

micrographs - single frame

Image format:

DM3

No. of images or tilt series:

282

Image size:

(10000, 10000)

Pixel type:

UNSIGNED 16 BIT INTEGER

Pixel spacing:

(3.1, 3.1)

Details:

---

Files:

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2. Unaligned SBF-SEM series of Plasmodium falciparum atg18-mNG:loxP mutant, DMSO-treated

Category:

micrographs - single frame

Image format:

DM3

No. of images or tilt series:

300

Image size:

(10000, 10000)

Pixel type:

UNSIGNED 16 BIT INTEGER

Pixel spacing:

(3.1, 3.1)

Details:

---

Files:

This entry cannot be downloaded from PDBj.

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We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

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Citations

A variational framework with composite sparse regularization for cryo-electron tomography reconstruction.

Yu C, Xu Z, Zeng Q, Wan X, El-Messiry H, Zhang F, Han R. (2026)

CryoFSL: an annotation-efficient, few-shot learning framework for robust protein particle picking in cryo-electron microscopy micrographs.

Poudel B, Gyawali R, Dhakal A, Cheng J, Xu D. (2026)

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

Unbend, correction of local beam-induced sample motion in cryo-EM images using a 3D spline model.

Kong L, Zottig X, Elferich J, Grigorieff N. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

Dual site targeting of the bacterial 70S ribosome by tetracyclines.

Devarkar SC, Lomakin IB, Wang J, Grada A, Bunick CG. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

See all citations

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[2026-07-01]

288 new PDB entries have been released on 2026-07-01.