EMPIAR-12891 - Proteasome particle purified from HCT116 dataset [27259 multi-frame micrographs composed of 40 frames each in TIFF format]

EMPIAR-12891

Proteasome particle purified from HCT116 dataset [27259 multi-frame micrographs composed of 40 frames each in TIFF format]

Publication:

Integrated structural biology and in situ mass spectrometry for TXNL1 and PSMD5 structures at 26S and 19S proteasome complexes

Lee K, Negi H, Chen X, Atallah-Yunes K, Truslow S, Ciancone A, Chari R, Walters KJ, O’Reilly FJ

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Related EMDB entry:

EMD-71740 EMD-71741 EMD-71737

Deposited:

2025-06-03

Released:

2026-07-07

Last modified:

2026-07-07

Imageset size:

10.21 TB

Imageset DOI:

10.6019/EMPIAR-12891

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. Unaligned multi-frame micrographs of 26S proteasome from HCT116 cells

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

27259

Image size:

(11520, 8184)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.405, 0.405)

Details:

---

Files:

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Citations

A variational framework with composite sparse regularization for cryo-electron tomography reconstruction.

Yu C, Xu Z, Zeng Q, Wan X, El-Messiry H, Zhang F, Han R. (2026)

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Poudel B, Gyawali R, Dhakal A, Cheng J, Xu D. (2026)

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

Unbend, correction of local beam-induced sample motion in cryo-EM images using a 3D spline model.

Kong L, Zottig X, Elferich J, Grigorieff N. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Dual site targeting of the bacterial 70S ribosome by tetracyclines.

Devarkar SC, Lomakin IB, Wang J, Grada A, Bunick CG. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

See all citations

Protein Data Bank Japan News

[2026-07-08]

260 new PDB entries have been released on 2026-07-08.