EMPIAR-10643 - Cryo-electron tomography of HIV-1 GagdeltaMASP1T8I assemblies [5 tilt series in MRC format]

EMPIAR-10643

Cryo-electron tomography of HIV-1 GagdeltaMASP1T8I assemblies [5 tilt series in MRC format]

Publication:

High-resolution in situ structure determination by cryo-electron tomography and subtomogram averaging using emClarity

Ni T, Frosio T, Mendonça L, Sheng Y, Clare D, Himes BA, Zhang P

Nature protocols 17 (2022) 421-444

PMID: 35022621

DOI: 10.1038/s41596-021-00648-5

Related EMDB entry:

EMD-13390

Deposited:

2021-02-19

Released:

2021-04-23

Last modified:

2022-02-28

Imageset size:

25.63 GB

Imageset DOI:

10.6019/EMPIAR-10643

Experimental metadata:

Download xml json

Contains:

tilt series

Image Sets

1. Motion-corrected tilt-series

Category:

tilt series

Image format:

MRC

No. of images or tilt series:

Image size:

(4096, 4096)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.179, 1.179)

Details:

Assembled and ordered tilt-series. 41 tilts. -/+ 60 degrees every 3 degrees.

The files were submitted in .fixed format due to a program used by the authors. We renamed them back to .mrc for our software to work with depositor permission.

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Browse All Files

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

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Citations

Structural basis for HIV-1 antagonism of host APOBEC3G via Cullin E3 ligase.

Ito F, Alvarez-Cabrera AL, Liu S, Yang H, Shiriaeva A, Zhou ZH, Chen XS. (2023)

The 2023 Nucleic Acids Research Database Issue and the online molecular biology database collection.

Rigden DJ, Fernández XM. (2023)

EMPIAR: the Electron Microscopy Public Image Archive.

Iudin A, Korir PK, Somasundharam S, Weyand S, Cattavitello C, Fonseca N, Salih O, Kleywegt GJ, Patwardhan A. (2023)

CLEMSite, a software for automated phenotypic screens using light microscopy and FIB-SEM.

Serra Lleti JM, Steyer AM, Schieber NL, Neumann B, Tischer C, Hilsenstein V, Holtstrom M, Unrau D, Kirmse R, Lucocq JM, Pepperkok R, Schwab Y. (2023)

Structure of a RecT/Redβ family recombinase in complex with a duplex intermediate of DNA annealing.

Caldwell BJ, Norris AS, Karbowski CF, Wiegand AM, Wysocki VH, Bell CE. (2022)

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