EMPIAR-12892 - Cryo ET of Native Hippocampal Glutamatergic Synapses Using Dimeric AuNP Labeling [33 multi-frame micrographs composed of 576 frames each in EER format]

EMPIAR-12892

Cryo ET of Native Hippocampal Glutamatergic Synapses Using Dimeric AuNP Labeling [33 multi-frame micrographs composed of 576 frames each in EER format]

Publication:

Dimeric gold nanoparticles enable multiplexed labeling in cryoelectron tomography.

Kim H, Spangler CJ, Matsui A, Elferich J, Kim J, Roseborough A, Nyman M, Lahtinen TM, Gouaux E

Proceedings of the National Academy of Sciences of the United States of America 122 (2025)

PMID: 41284882

DOI: 10.1073/pnas.2524034122

Related EMDB entry:

EMD-71801 EMD-71954 EMD-71958 EMD-71955 EMD-71957 EMD-71956 EMD-71959

Deposited:

2025-07-24

Released:

2025-12-18

Last modified:

2025-12-18

Imageset size:

41.55 GB

Imageset DOI:

10.6019/EMPIAR-12892

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. Cryo ET of Native Hippocampal Glutamatergic Synapses Using Dimeric AuNP Labeling

Category:

micrographs - multiframe

Image format:

EER

No. of images or tilt series:

Image size:

(None, None)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(None, None)

Details:

---

Files:

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Citations

AlignPCA-2D: PCA-reduced Euclidean vector alignment for 2D classification in cryo-EM.

Ramírez-Aportela E, Zarrabeitia OL, Fonseca YC, Ceska T, Subramaniam S, Carazo JM, Sorzano COS. (2026)

A variational framework with composite sparse regularization for cryo-electron tomography reconstruction.

Yu C, Xu Z, Zeng Q, Wan X, El-Messiry H, Zhang F, Han R. (2026)

Helical reconstruction of amyloids in cryoSPARC.

Schaefer JH, O'Neill RT, Donnelly JP, Powers ET, Kelly JW, Lander GC. (2026)

An unattended image-processing pipeline for on-the-fly quality assessment and 3D exploration in cryo-EM.

Marchán Torres D, Conesa P, Garcia A, Iceta M, Broche L, Gragera M, Linares R, Kwong HS, Chichón FJ, Svensson O, Arranz R, Effantin G, Kandiah E, Carazo JM, Sorzano COS. (2026)

CryoFSL: an annotation-efficient, few-shot learning framework for robust protein particle picking in cryo-electron microscopy micrographs.

Poudel B, Gyawali R, Dhakal A, Cheng J, Xu D. (2026)

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

Unbend, correction of local beam-induced sample motion in cryo-EM images using a 3D spline model.

Kong L, Zottig X, Elferich J, Grigorieff N. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

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