The naming correspondence between raw micrographs and tilt series/tomograms can be found in frames2tomos.txt. The respective gain-reference file is SuperCDSRef_A_000_0.0.dm4 For this dataset raw micrographs were collected in 10 frames with a total dose per tilt view of 4.1391 e−/Å2 and the total dose distributed equally among all tilt images. See top-level README.txt for contents location details.
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The naming correspondence between raw micrographs and tilt series/tomograms can be found in frames2tomos.txt. The respective gain-reference file is SuperCDSRef_ts_051_000_-0.0.dm4 For this dataset raw micrographs were collected using high-dose zero-tilt scheme. Thus, a zero-tilt micrographs were collected in 75 frames with a total dose per image of 31.077 e−/Å2 and other tilt micrographs were collected in 10 frames with a total dose per image of 4.1391 e−/Å2. See top-level README.txt for contents location details.
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Depending on the number and size of files to be downloaded, this can take an enormous amount of time.
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The metadata files could be used to align tilt stacks (.tlt and .xf), correct CTF (.defocus) and perform 3D reconstruction (.tlt), e.g. using IMOD.
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Particle coordinates and orientations could be found in the subfolder "/data/particle_tables/" of this deposition. For additional info see file prtcls_description_dataset_1.txt
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Also, this feature is unstable and may not work properly, and checksums of downloaded files are not verified.
We recommend using rsync, aspera, globus, etc.
Download a list of selected files.
It is possible to download files by specifying the file list with rsync command, etc.
