EMPIAR-12238 - Cryo-electron tomography of Mycobacterium smegmatis infected with bacteriophage Bxb1 [35 tilt series in MRC format]

EMPIAR-12238

Cryo-electron tomography of Mycobacterium smegmatis infected with bacteriophage Bxb1 [35 tilt series in MRC format]

Publication:

Structure and infection dynamics of mycobacteriophage Bxb1

Freeman K.G., Mondal S, Hatfull G.F., Park D

(---)

Related EMDB entry:

EMD-46702

Deposited:

2024-08-23

Released:

2025-02-03

Last modified:

2025-02-03

Imageset size:

954.44 GB

Imageset DOI:

10.6019/EMPIAR-12238

Experimental metadata:

Download xml json

Contains:

tilt series

Image Sets

1. Unaligned tiltseries of Mycobacterium smegmatis infected with Bxb1 phage

Category:

tilt series

Image format:

MRC

No. of images or tilt series:

Image size:

(5760, 4092)

Pixel type:

SIGNED 32 BIT INTEGER

Pixel spacing:

(1.663, 1.663)

Details:

Tiltseries collected on cryo-FIB milled sample. PACEtomo is used to collect the data.

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Citations

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

Point cloud deformation modeling for particle selection following cryo-EM 2D classification.

Wang X, Mo Z, Li F, Zhang F, Wan X. (2026)

ICECREAM: high-fidelity equivariant cryo-electron tomography.

Kishore V, Debarnot V, Righetto RD, Engel BD, Dokmanić I. (2026)

CryoSift: an accessible and automated CNN-driven tool for cryo-EM 2D class selection.

Schäfer JH, Calza A, Hom K, Damodar P, Peng R, Bogdanović N, Lander GC, Stagg SM, Cianfrocco MA. (2025)