EMPIAR-11907 - In situ cryo-electron tomography of Saccharomyces cerevisiae [37 multi-frame micrographs composed of 252 frames each in EER format]

EMPIAR-11907

In situ cryo-electron tomography of Saccharomyces cerevisiae [37 multi-frame micrographs composed of 252 frames each in EER format]

Publication:

Tomo Live: An on-the-fly reconstruction pipeline to judge data quality for cryo-electron tomography workflows

Comet M, Dijkman PM, Boer Iwema R, Franke T, Masiulis S, Schampers R, Raschdorf O, Grollios F, Pryor Jr. EE, Drulyte I

Acta Crystallographica Section D (2024)

Related EMDB entry:

EMD-19671

Deposited:

2024-02-19

Released:

2024-05-16

Last modified:

2024-05-16

Imageset size:

3.05 GB

Imageset DOI:

10.6019/EMPIAR-11907

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. EER movies of Saccharomyces cerevisiae lamella

Category:

micrographs - multiframe

Image format:

EER

No. of images or tilt series:

Image size:

(4096, 4096)

Pixel type:

UNSIGNED 16 BIT INTEGER

Pixel spacing:

(1.97, 1.97)

Details:

---

Files:

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Citations

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

Point cloud deformation modeling for particle selection following cryo-EM 2D classification.

Wang X, Mo Z, Li F, Zhang F, Wan X. (2026)

ICECREAM: high-fidelity equivariant cryo-electron tomography.

Kishore V, Debarnot V, Righetto RD, Engel BD, Dokmanić I. (2026)

CryoSift: an accessible and automated CNN-driven tool for cryo-EM 2D class selection.

Schäfer JH, Calza A, Hom K, Damodar P, Peng R, Bogdanović N, Lander GC, Stagg SM, Cianfrocco MA. (2025)