EMPIAR-11709 - A tomogram of a concave region on the nucleus of a neutrophil [57 multi-frame micrographs composed of 10 frames each in TIFF format]

EMPIAR-11709

A tomogram of a concave region on the nucleus of a neutrophil [57 multi-frame micrographs composed of 10 frames each in TIFF format]

Publication:

Vimentin regulates nuclear segmentation in neutrophils

Liu J, Li Z, Li M, Du W, Baumeister W, Yang J, Guo Q

Proceedings of the National Academy of Sciences of the United States of America 120 (2023)

PMID: 37983515

DOI: 10.1073/pnas.2307389120

Related EMDB entry:

EMD-35979

Deposited:

2023-10-04

Released:

2025-07-16

Last modified:

2025-07-16

Imageset size:

35.72 GB

Imageset DOI:

10.6019/EMPIAR-11709

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. Unaligned mutiframe micrographs of the concave nuclear region in a neutrophil

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

Image size:

(11520, 8184)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(1.66, 1.66)

Details:

Data was collected in super resolution mode. Frames before motion correction are in the folder: "frames". Segmentation is in the folder "Segmentation" (can be opened by ChimeraX). Coordinates for ribosomes and fibers are deposed in "ribo_coord" and "fiber_coord".

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Citations

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Schäfer JH, Calza A, Hom K, Damodar P, Peng R, Bogdanović N, Lander GC, Stagg SM, Cianfrocco MA. (2025)