EMPIAR-11407
IgG3-C1-C4b complex on a lipid bilayer [stack of 2561 particles in MRC format]
Publication:

Complement is activated by elevated IgG3 hexameric platforms and deposits C4b onto distinct antibody domains

Abendstein LA

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Related EMDB entry:
Deposited:
2023-01-31
Released:
2023-06-23
Last modified:
2023-06-23
Imageset size:
160.06 GB
Imageset DOI:
Experimental metadata:
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Contains:
  • picked particles - multiframe - processed
1. extracted particles - IgG3-C1-C4b complexes bound to DNP representing liposomes
Category:
picked particles - multiframe - processed
Image format:
MRC
No. of images or tilt series:
2561
Image size:
(256, 256)
Pixel type:
32 BIT FLOAT
Pixel spacing:
(3.48, 3.48)
Details:
Tilt series were collected on a Talos Arctica (200kV) microscope with a K3 direct electron detector and a Bioquantum energy filter (slit width=20 eV; Gatan). Tomograms were reconstructed using weighed back-projection in IMOD4.11.Particles were manually picked in EMAN2 (version 2.91) using 2spt_boxer_old.py. 2,561 particles were extracted from 101 tomograms with a box size of 256 pixels and a final pixel size of 3.48 Å/pixel.
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Ito F, Alvarez-Cabrera AL, Liu S, Yang H, Shiriaeva A, Zhou ZH, Chen XS. (2023)
Rigden DJ, Fernández XM. (2023)
Iudin A, Korir PK, Somasundharam S, Weyand S, Cattavitello C, Fonseca N, Salih O, Kleywegt GJ, Patwardhan A. (2023)
Serra Lleti JM, Steyer AM, Schieber NL, Neumann B, Tischer C, Hilsenstein V, Holtstrom M, Unrau D, Kirmse R, Lucocq JM, Pepperkok R, Schwab Y. (2023)
Caldwell BJ, Norris AS, Karbowski CF, Wiegand AM, Wysocki VH, Bell CE. (2022)