EMPIAR-11147 - E. coli 50S ribosome bound to compound streptogramin analog SAB001 [multiple data sets in TIFF and MRC formats]

EMPIAR-11147

E. coli 50S ribosome bound to compound streptogramin analog SAB001 [multiple data sets in TIFF and MRC formats]

Publication:

Potential for clicked streptogramin analogs

Takahashi Y, Seiple IB, Pellegrino J, Fraser JS, Lee DJ

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Related EMDB entry:

EMD-27855

Deposited:

2022-05-25

Released:

2023-06-29

Last modified:

2023-06-29

Imageset size:

1.60 TB

Imageset DOI:

10.6019/EMPIAR-11147

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe
micrographs - single frame

Image Sets

1. unaligned movies of 50S E. coli ribosome bound to SAB001

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

1960

Image size:

(11520, 8184)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.41, 0.41)

Details:

---

Files:

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2. dose weighted micrographs of 50S E. coli ribosome bound to SAB001

Category:

micrographs - single frame

Image format:

MRC

No. of images or tilt series:

1960

Image size:

(5760, 4092)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(0.8261, 0.8261)

Details:

---

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

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Citations

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He L, Bartesaghi A. (2026)

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Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

Point cloud deformation modeling for particle selection following cryo-EM 2D classification.

Wang X, Mo Z, Li F, Zhang F, Wan X. (2026)

ICECREAM: high-fidelity equivariant cryo-electron tomography.

Kishore V, Debarnot V, Righetto RD, Engel BD, Dokmanić I. (2026)

CryoSift: an accessible and automated CNN-driven tool for cryo-EM 2D class selection.

Schäfer JH, Calza A, Hom K, Damodar P, Peng R, Bogdanović N, Lander GC, Stagg SM, Cianfrocco MA. (2025)