EMPIAR-10838 - CryoEM SPA dataset for NB21, SARS-Cov-2 and NB36 trimeric complex [9390 multi-frame micrographs composed of 63 frames each in TIFF format]

EMPIAR-10838

CryoEM SPA dataset for NB21, SARS-Cov-2 and NB36 trimeric complex [9390 multi-frame micrographs composed of 63 frames each in TIFF format]

Publication:

Potent neutralizing nanobodies resist convergent circulating variants of SARS-CoV-2 by targeting diverse and conserved epitopes

Sun D, Sang Z, Kim YJ, Xiang Y, Cohen T, Belford AK, Huet A, Conway JF, Sun J, Taylor DJ, Schneidman-Duhovny D, Zhang C, Huang W, Shi Y

Nature communications 12 (2021) 1-14

PMID: 34344900

DOI: 10.1038/s41467-021-24963-3

Related EMDB entry:

EMD-23790

Deposited:

2021-10-29

Released:

2021-11-05

Last modified:

2021-11-08

Imageset size:

5.04 TB

Imageset DOI:

10.6019/EMPIAR-10838

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. raw movie stacks

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

9390

Image size:

(11520, 8184)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.412, 0.412)

Details:

mag: 105000 pixel size: 0.412 A/pixel dose:89.08 e-/A^2

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Citations

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

Point cloud deformation modeling for particle selection following cryo-EM 2D classification.

Wang X, Mo Z, Li F, Zhang F, Wan X. (2026)

ICECREAM: high-fidelity equivariant cryo-electron tomography.

Kishore V, Debarnot V, Righetto RD, Engel BD, Dokmanić I. (2026)

CryoSift: an accessible and automated CNN-driven tool for cryo-EM 2D class selection.

Schäfer JH, Calza A, Hom K, Damodar P, Peng R, Bogdanović N, Lander GC, Stagg SM, Cianfrocco MA. (2025)