EMPIAR-13708 - Bovine lactoferrin particles in TBS for energy landscape analysis. [8443 multi-frame micrographs composed of 64 frames each in TIFF format]

EMPIAR-13708

Bovine lactoferrin particles in TBS for energy landscape analysis. [8443 multi-frame micrographs composed of 64 frames each in TIFF format]

Publication:

Generation of Conformational Energy Landscape from Lactoferrin cryo-EM images with Mitigated Preferred Orientations by cryoTWIN

Wada M, Yamazaki K, Wada Y, Ohga K, Ishii Y, Nakagawa A, Yoshikawa H, Okuno S, Nojima T, Ochi H, Hirose M, Kato T, Katoh T

SPIE 14267 (2026)

DOI: 10.1117/12.3119418

Related EMDB entry:

EMD-68586

Deposited:

2025-12-22

Released:

2026-08-07

Last modified:

2026-08-07

Imageset size:

2.36 TB

Imageset DOI:

10.6019/EMPIAR-13708

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. imageset_1

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

8443

Image size:

(4092, 5760)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.675, 0.675)

Details:

- Microscope: FEI TITAN Krios
- Detector: Gatan K3 BIOQUANTUM
- Acceleration voltage (kV): 300
- Spherical aberration (Cs) : 2.7
- Nominal Defocus (μm): 0.8 - 2.0
- Average electron dose per image (e-/A2): 50.2
- Please use 'CountCDSRef_250304_slot2_43-107_19.51.11_X+0Y-1-0.mrc' as a gain reference without rotation and y-flipping.

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Citations

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prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

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CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

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CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

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The vault associates with membranes in situ.

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Protein Data Bank Japan News

[2026-08-05]

455件のPDBエントリーが新たに公開されました。（2026-08-05付）