EMPIAR-12819 - Cryo-electron microscopy of potato virus A [2022 multi-frame micrographs composed of 38 frames each in TIFF format]

EMPIAR-12819

Cryo-electron microscopy of potato virus A [2022 multi-frame micrographs composed of 38 frames each in TIFF format]

Publication:

Species-specific structural adaptation of the potyviral coat protein in virions and virus-like particles

Koritnik N, Kežar A, Kavčič L, Tušek Žnidarič M, Leonardi A, Pollari M, Mäkinen K, Podobnik M

Communications biology (2026)

PMID: 41530503

DOI: 10.1038/s42003-025-09502-w

Related EMDB entry:

EMD-53790

Deposited:

2025-05-21

Released:

2026-01-26

Last modified:

2026-01-26

Imageset size:

1.42 TB

Imageset DOI:

10.6019/EMPIAR-12819

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. Unaligned multiframe micrographs of potato virus A

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

2022

Image size:

(4096, 4096)

Pixel type:

SIGNED 16 BIT INTEGER

Pixel spacing:

(0.95, 0.95)

Details:

The movies were imaged (Glacios, 200 kV) in counting mode with Falcon3 (Thermo Fisher Scientific) direct electron detector at a nominal magnification of 150,000 with a total electron dose of 40 e-/Å2.

Files:

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Citations

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Poudel B, Gyawali R, Dhakal A, Cheng J, Xu D. (2026)

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Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

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Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Dual site targeting of the bacterial 70S ribosome by tetracyclines.

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Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

Point cloud deformation modeling for particle selection following cryo-EM 2D classification.

Wang X, Mo Z, Li F, Zhang F, Wan X. (2026)

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