EMPIAR-12541 - Cryo electron micrographs of Kaposi’s sarcoma-associated herpesvirus glycoprotein B in post-fusion conformation [14633 multi-frame micrographs composed of 49 frames each in TIFF format]

EMPIAR-12541

Cryo electron micrographs of Kaposi’s sarcoma-associated herpesvirus glycoprotein B in post-fusion conformation [14633 multi-frame micrographs composed of 49 frames each in TIFF format]

Publication:

Structure of the Kaposi’s sarcoma-associated herpesvirus gB in post-fusion conformation

Ito F, Zhen J, Xie G, Huang H, Silva JC, Wu T-T, Zhou ZH

Journal of Virology (---)

PMID: 39818969

DOI: 10.1128/jvi.01533-24

Related EMDB entry:

EMD-45927

Deposited:

2025-01-29

Released:

2025-03-17

Last modified:

2025-03-17

Imageset size:

3.53 TB

Imageset DOI:

10.6019/EMPIAR-12541

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. Unaligned multi-frame micrographs of Kaposi’s sarcoma-associated herpesvirus gB in post-fusion conformation

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

14633

Image size:

(5760, 4092)

Pixel type:

BIT

Pixel spacing:

(0.86, 0.86)

Details:

The gain reference image in mrc format is in the GainRef directory in both no tilt and 30 degrees tilt dataset directories, it needs to be flipped in Y.

Files:

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Citations

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

Point cloud deformation modeling for particle selection following cryo-EM 2D classification.

Wang X, Mo Z, Li F, Zhang F, Wan X. (2026)

ICECREAM: high-fidelity equivariant cryo-electron tomography.

Kishore V, Debarnot V, Righetto RD, Engel BD, Dokmanić I. (2026)

CryoSift: an accessible and automated CNN-driven tool for cryo-EM 2D class selection.

Schäfer JH, Calza A, Hom K, Damodar P, Peng R, Bogdanović N, Lander GC, Stagg SM, Cianfrocco MA. (2025)