EMPIAR-12465 - Cryo-EM structure of the decameric TraT surface exclusion lipoprotein from Escherichia coli (F plasmid) [8061 multi-frame micrographs composed of 40 frames each in TIFF format]

EMPIAR-12465

Cryo-EM structure of the decameric TraT surface exclusion lipoprotein from Escherichia coli (F plasmid) [8061 multi-frame micrographs composed of 40 frames each in TIFF format]

Publication:

Cryo-EM structure and evolutionary history of the conjugation surface exclusion protein TraT

Seddon C, David S, Wong JL, Ishimoto N, He S, Bradshaw J, Low WW, Frankel G, Beis K

bioRxiv (---)

DOI: 10.1101/2024.08.09.607165

Related EMDB entry:

EMD-50723

Deposited:

2024-11-23

Released:

2025-01-17

Last modified:

2025-01-17

Imageset size:

1023.70 GB

Imageset DOI:

10.6019/EMPIAR-12465

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. unaligned multiframe micrographs for the cryo-EM structure of the decameric TraT surface exclusion lipoprotein from Escherichia coli (F plasmid)

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

8061

Image size:

(5760, 4092)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(1.0, 1.0)

Details:

---

Files:

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Citations

A variational framework with composite sparse regularization for cryo-electron tomography reconstruction.

Yu C, Xu Z, Zeng Q, Wan X, El-Messiry H, Zhang F, Han R. (2026)

CryoFSL: an annotation-efficient, few-shot learning framework for robust protein particle picking in cryo-electron microscopy micrographs.

Poudel B, Gyawali R, Dhakal A, Cheng J, Xu D. (2026)

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

Unbend, correction of local beam-induced sample motion in cryo-EM images using a 3D spline model.

Kong L, Zottig X, Elferich J, Grigorieff N. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Dual site targeting of the bacterial 70S ribosome by tetracyclines.

Devarkar SC, Lomakin IB, Wang J, Grada A, Bunick CG. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

See all citations

Protein Data Bank Japan News

[2026-06-17]

324件のPDBエントリーが新たに公開されました。（2026-06-17付）