EMPIAR-12294 - cryo electron tomography of Pickering-emulsified condensate (LAF based scaffolds and GFP(-9)-6his-mi3 cage protein) [400 reconstructed volumes in TIFF format]

EMPIAR-12294

cryo electron tomography of Pickering-emulsified condensate (LAF based scaffolds and GFP(-9)-6his-mi3 cage protein) [400 reconstructed volumes in TIFF format]

Publication:

Size-controlled synthesis of phase separated protein condensates with interfacial protein cages

Lee YS, Oh HJ, Hwang HR, Hong K, Choi H, Kang JY, Jung YW

(---)

DOI: 10.26434/chemrxiv-2024-nkftl

Related EMDB entry:

Deposited:

2024-09-21

Released:

2025-01-09

Last modified:

2025-01-09

Imageset size:

1.56 GB

Imageset DOI:

10.6019/EMPIAR-12294

Experimental metadata:

Download xml json

Contains:

reconstructed volumes

Image Sets

1. tomogram image stack of GFP(-9)-his6-mi3 emulsified LAF condensates

Category:

reconstructed volumes

Image format:

TIFF

No. of images or tilt series:

400

Image size:

(2048, 2048)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(2.4, 2.4)

Details:

tomographic reconstruction of LAF-based condensates emulsified with GFP(-9)-his6-mi3 cage proteins used as a Pickering emulsifier. thick black spots are AuNPs used as a fiducial marker.

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Citations

A variational framework with composite sparse regularization for cryo-electron tomography reconstruction.

Yu C, Xu Z, Zeng Q, Wan X, El-Messiry H, Zhang F, Han R. (2026)

CryoFSL: an annotation-efficient, few-shot learning framework for robust protein particle picking in cryo-electron microscopy micrographs.

Poudel B, Gyawali R, Dhakal A, Cheng J, Xu D. (2026)

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

Unbend, correction of local beam-induced sample motion in cryo-EM images using a 3D spline model.

Kong L, Zottig X, Elferich J, Grigorieff N. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

Dual site targeting of the bacterial 70S ribosome by tetracyclines.

Devarkar SC, Lomakin IB, Wang J, Grada A, Bunick CG. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

See all citations

Protein Data Bank Japan News

[2026-07-01]

288件のPDBエントリーが新たに公開されました。（2026-07-01付）