EMPIAR-12192 - Proton-powered peptide transporter SbmA in lipid nanodisc complexed with Fab S11-1 at pH 5.5 [6069 multi-frame micrographs composed of 40 frames each in TIFF format]

EMPIAR-12192

Proton-powered peptide transporter SbmA in lipid nanodisc complexed with Fab S11-1 at pH 5.5 [6069 multi-frame micrographs composed of 40 frames each in TIFF format]

Publication:

Structure and function of SLiPT transporters

Ettema T.W., Thangaratnarajah C., Inaba-Inoue S., Stepien P., Heddle J.G.H., Stockner T., Pliotas C., Slotboom D.J., Beis K.

Nature Communications (2024)

Related EMDB entry:

EMD-51037 EMD-51036

Deposited:

2024-07-15

Released:

2025-12-07

Last modified:

2025-12-07

Imageset size:

2.42 TB

Imageset DOI:

10.6019/EMPIAR-12192

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. Gain-corrected unaligned K3 movies compressed in TIFF format, 40 frames each, total dose 42.39 e/A

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

6069

Image size:

(5760, 4092)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.86, 0.86)

Details:

A parameters file with further information is included

Files:

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Citations

A variational framework with composite sparse regularization for cryo-electron tomography reconstruction.

Yu C, Xu Z, Zeng Q, Wan X, El-Messiry H, Zhang F, Han R. (2026)

CryoFSL: an annotation-efficient, few-shot learning framework for robust protein particle picking in cryo-electron microscopy micrographs.

Poudel B, Gyawali R, Dhakal A, Cheng J, Xu D. (2026)

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

Unbend, correction of local beam-induced sample motion in cryo-EM images using a 3D spline model.

Kong L, Zottig X, Elferich J, Grigorieff N. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Dual site targeting of the bacterial 70S ribosome by tetracyclines.

Devarkar SC, Lomakin IB, Wang J, Grada A, Bunick CG. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

See all citations

Protein Data Bank Japan News

[2026-06-10]

333件のPDBエントリーが新たに公開されました。（2026-06-10付）