EMPIAR-12141 - Structure of mavacamten-free human cardiac thick filaments within the sarcomere by cryoelectron tomography [multiple data sets in MRC format]

EMPIAR-12141

Structure of mavacamten-free human cardiac thick filaments within the sarcomere by cryoelectron tomography [multiple data sets in MRC format]

Publication:

Structure of mavacamten-free human cardiac thick filaments within the sarcomere by cryoelectron tomography

Chen L, Liu J, Rastegarpouyani H, Janssen PML, Pinto JR, Taylor KA

Proceedings of the National Academy of Sciences of the United States of America 121 (2024)

PMID: 38386705

DOI: 10.1073/pnas.2311883121

Related EMDB entry:

EMD-40475 EMD-40478 EMD-40471 EMD-40476 EMD-40468

Deposited:

2024-05-16

Released:

2024-07-08

Last modified:

2024-07-08

Imageset size:

25.64 GB

Imageset DOI:

10.6019/EMPIAR-12141

Experimental metadata:

Download xml json

Contains:

tilt series

Image Sets

1. Tilt series of micrographs (magnification 42k) from sarcomeres of human cardiac muscle in the relaxed condition

Category:

tilt series

Image format:

MRC

No. of images or tilt series:

Image size:

(4092, 5760)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(2.118, 2.118)

Details:

The tilt series in the data directory (not including the files in the subdirectory Mag64k) were taken under 42k magnification. The pixel size was calibrated to 2.118 A. The tilt series in the subdirectory Mag64k were taken under 64k magnification. The pixel size was calibrated to 1.346 A.

Files:

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rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

2. Tilt series of micrographs (magnification 64k) from sarcomeres of human cardiac muscle in the relaxed condition

Category:

tilt series

Image format:

MRC

No. of images or tilt series:

Image size:

(4092, 5760)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.346, 1.346)

Details:

Files:

選択したファイルを無圧縮zipファイルにアーカイブ化してダウンロードします。

rsync、aspera、globus 等の利用をおすすめします。

選択したファイルのリストをダウンロードします。

rsyncコマンド等でファイルリストを指定してダウンロードすることが可能です。

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

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Citations

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prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

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CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Dual site targeting of the bacterial 70S ribosome by tetracyclines.

Devarkar SC, Lomakin IB, Wang J, Grada A, Bunick CG. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

See all citations

Protein Data Bank Japan News

[2026-06-17]

324件のPDBエントリーが新たに公開されました。（2026-06-17付）