EMPIAR-12097 - Particle stack from SARS-CoV-2 (wuhan variant) Spike protein in complex with the single chain fragment scFv76-77 single particle cryo-EM data [stack of 3774 particles in MRCS format]

EMPIAR-12097

Particle stack from SARS-CoV-2 (wuhan variant) Spike protein in complex with the single chain fragment scFv76-77 single particle cryo-EM data [stack of 3774 particles in MRCS format]

Publication:

SARS-CoV-2 (wuhan variant) Spike protein in complex with the single chain fragment scFv76-77

Chaves-Sanjuan A, Berlinguer M, Bolognesi M

(---)

Related EMDB entry:

EMD-50417 EMD-50418

Deposited:

2024-05-26

Released:

2024-06-13

Last modified:

2024-06-13

Imageset size:

304.75 GB

Imageset DOI:

10.6019/EMPIAR-12097

Experimental metadata:

Download xml json

Contains:

picked particles - multiframe - unprocessed

Image Sets

1. Particle stack and .star files of the initial and the final set of particles of the SARS-CoV-2 (wuhan variant) Spike protein in complex with the single chain fragment scFv76-77 data set

Category:

picked particles - multiframe - unprocessed

Image format:

MRCS

No. of images or tilt series:

3774

Image size:

(400, 400)

Pixel type:

UNSIGNED 32 BIT INTEGER

Pixel spacing:

(0.889, 0.889)

Details:

The particle stack in the particle folder contains both particles of the initial set of picked particles and the final reconstruction.

Files:

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Citations

A variational framework with composite sparse regularization for cryo-electron tomography reconstruction.

Yu C, Xu Z, Zeng Q, Wan X, El-Messiry H, Zhang F, Han R. (2026)

CryoFSL: an annotation-efficient, few-shot learning framework for robust protein particle picking in cryo-electron microscopy micrographs.

Poudel B, Gyawali R, Dhakal A, Cheng J, Xu D. (2026)

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

Unbend, correction of local beam-induced sample motion in cryo-EM images using a 3D spline model.

Kong L, Zottig X, Elferich J, Grigorieff N. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Dual site targeting of the bacterial 70S ribosome by tetracyclines.

Devarkar SC, Lomakin IB, Wang J, Grada A, Bunick CG. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

See all citations

Protein Data Bank Japan News

[2026-06-10]

333件のPDBエントリーが新たに公開されました。（2026-06-10付）