EMPIAR-11411
Molecular mechanism of Trypanosoma brucei Aquaporin 2 with melarsoprol [multiple data sets in MRC and MRCS formats]
Publication:

Insights from aquaporin structures into drug-resistant sleeping sickness

Mutusevicius M, Corey RA, Gragera M, Yamashita K, Sprenger T, Ungogo MA, Blaza JM, Castro-Hartmann P, Chirgadze DY, Vedithi SC, Afanasyev P, Melero R, Warshamanage R, Gusach A, Carazo JM, Carrington M, Blundell TM, Murshudov G, Stansfeld P, Sansom M, De Koning HP, Tate CG, Weyand SN

eLife RP107460 (2025)

Related EMDB entry:
Deposited:
2023-01-23
Released:
2025-10-23
Last modified:
2025-10-23
Imageset size:
1.20 TB
Imageset DOI:
Experimental metadata:
Download xml json

Compressed by PDBj:

Image formats and pixel types shown below are those of the original, non-compressed files.

Movies (Export/Images-Disc1/GridSquare_*/Data/FoilHole_*.mrc) in this entry were compressed to TIFF
by EMPIAR Japan to save space and bandwidth.
The compression is lossless in that all pixel intensities remain exactly the same after decompression.
However, some metadata in the MRC header were lost.
The original files before compression are available from EMPIAR EBI.

Compression was carried out by separating (“un-normalizing”) the gain.
The details of the method are described in
https://relion.readthedocs.io/en/release-3.1/Reference/MovieCompression.html#gain-normalised-movies.

Please apply the gain reference (Export/Images-Disc1/gain-reference.mrc) during processing.

PDBj discovered that this entry contained one RSYNC temporary file
(Export/Images-Disc1/GridSquare_7402420/Data/.FoilHole_7409440_Data_7416445_7416446_20190210_1558-136921.mrc.0u7lsa)
and removed it.

Original size:   9,089,188,178 kilobytes
Compressed size: 1,014,695,568 kilobytes
Contains:
  • micrographs - single frame
  • picked particles - single frame - processed
  • micrographs - multiframe
1. Aligned dose-weighted micrographs of Aqp2 + melarsoprol from Trypanosoma brucei (MotionCorr2 output)
Category:
micrographs - single frame
Image format:
MRC
No. of images or tilt series:
4087
Image size:
(3838, 3710)
Pixel type:
32 BIT FLOAT
Pixel spacing:
(1.07, 1.07)
Details:
Aligned (all frames) and dose-weighted micrographs from MotionCorr2
Files:
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2. Particle set of the final 3D reconstruction of Aqp2 + melarsoprol from Trypanosoma brucei
Category:
picked particles - single frame - processed
Image format:
MRCS
No. of images or tilt series:
126551
Image size:
(320, 320)
Pixel type:
32 BIT FLOAT
Pixel spacing:
(1.07, 1.07)
Details:
Particles that yielded the final 3D reconstruction of Aqp2 + melarsoprol.
Files:
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3. Raw movies of Aqp2 + melarsoprol from Trypanosoma brucei
Category:
micrographs - multiframe
Image format:
MRC
No. of images or tilt series:
4087
Image size:
(3838, 3710)
Pixel type:
32 BIT FLOAT
Pixel spacing:
(1.07, 1.07)
Details:
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Files:
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