EMPIAR-11010 - Cryo-electron microscopy reconstruction of PCAT1 in three distinct inward-facing conformations during ATP turnover condition [11966 multi-frame micrographs composed of 50 frames each in TIFF format]

EMPIAR-11010

Cryo-electron microscopy reconstruction of PCAT1 in three distinct inward-facing conformations during ATP turnover condition [11966 multi-frame micrographs composed of 50 frames each in TIFF format]

Publication:

Structures of the peptidase-containing ABC transporter PCAT1 under equilibrium and nonequilibrium conditions

Kieuvongngam V, Chen J

Proceedings of the National Academy of Sciences of the United States of America 119 (2022)

PMID: 35074919

DOI: 10.1073/pnas.2120534119

Related EMDB entry:

EMD-25696 EMD-25695 EMD-25697

Deposited:

2021-11-08

Released:

2022-06-21

Last modified:

2022-06-21

Imageset size:

5.23 TB

Imageset DOI:

10.6019/EMPIAR-11010

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. Unaligned, uncorrected movies of PCAT1 in ATP active turnover condition

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

11966

Image size:

(7420, 7676)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.515, 0.515)

Details:

There are two datasets separated in subdirectories. Each set contains super-resolution, raw, uncorrected movies and gain references that have been flipped and rotated by 90 degrees for use. The super-resolution pixel size is 0.515 before binning.

Files:

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Citations

A variational framework with composite sparse regularization for cryo-electron tomography reconstruction.

Yu C, Xu Z, Zeng Q, Wan X, El-Messiry H, Zhang F, Han R. (2026)

CryoFSL: an annotation-efficient, few-shot learning framework for robust protein particle picking in cryo-electron microscopy micrographs.

Poudel B, Gyawali R, Dhakal A, Cheng J, Xu D. (2026)

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

Unbend, correction of local beam-induced sample motion in cryo-EM images using a 3D spline model.

Kong L, Zottig X, Elferich J, Grigorieff N. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Dual site targeting of the bacterial 70S ribosome by tetracyclines.

Devarkar SC, Lomakin IB, Wang J, Grada A, Bunick CG. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

See all citations

Protein Data Bank Japan News

[2026-06-10]

333件のPDBエントリーが新たに公開されました。（2026-06-10付）